RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MARCH7Q9H992 704 aa9.07□□□□□ -0.96
RNF4-212ENST00000509258 SMURF1Q9HCE7 757 aa9.07□□□□□ -0.96
RNF4-212ENST00000509258 CMC2Q9NRP2 79 aa9.07□□□□□ -0.96
RNF4-212ENST00000509258 DUX4Q9UBX2 424 aa9.07□□□□□ -0.96
RNF4-212ENST00000509258 PRPF19Q9UMS4 504 aaKnown RBP9.07□□□□□ -0.96
RNF4-212ENST00000509258 IGHV3OR15-7A0A075B7D8 119 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 PRR32B1ATL7 298 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 ZNF878C9JN71 531 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 PLATP00750 562 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 LIPFP07098 398 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 FMO3P31513 532 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 GRK5P34947 590 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 PSMB10P40306 273 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 CX3CR1P49238 355 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 FAM3AP98173 230 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 EIF2B1Q14232 305 aaKnown RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 OR8G1Q15617 311 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 TMEM236Q5W0B7 351 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 CD276Q5ZPR3 534 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 WDR25Q64LD2 544 aaPredicted RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 C16orf87Q6PH81 154 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 DRAM2Q6UX65 266 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 ERI1Q8IV48 349 aaKnown RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 OR6N2Q8NGY6 317 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 SPRYD4Q8WW59 207 aaPredicted RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 SPTSSAQ969W0 71 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 SPSB4Q96A44 273 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 SGK3Q96BR1 496 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 SEH1LQ96EE3 360 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 NUDT16L1Q9BRJ7 211 aaKnown RBP9.06□□□□□ -0.96
RNF4-212ENST00000509258 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 DNAJC27Q9NZQ0 273 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 ERVK-18Q9QC07 812 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 BAIAP2Q9UQB8 552 aa9.06□□□□□ -0.96
RNF4-212ENST00000509258 NOTCH1P46531 2555 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 DSCAML1Q8TD84 2053 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 KIR2DS1A0A191URI9 304 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 hCG_38984A0A1B0GV85 526 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 GGT3PA6NGU5 568 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 RIIAD1A6NNX1 92 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
RNF4-212ENST00000509258 NDUFA2O43678 99 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 GLCEO94923 617 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 CST1P01037 141 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 TFF1P04155 84 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 ZNF3P17036 446 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 MDKP21741 143 aaPredicted RBP9.05□□□□□ -0.96
RNF4-212ENST00000509258 SLC2A5P22732 501 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 OPRL1P41146 370 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 HCCSP53701 268 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 ZNF121P58317 390 aaPredicted RBP9.05□□□□□ -0.96
RNF4-212ENST00000509258 CSNK2BP67870 215 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 GINS1Q14691 196 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 MIDNQ504T8 468 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 PLBD1Q6P4A8 553 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 FAM57BQ71RH2 274 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 SLC16A9Q7RTY1 509 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 GCSAMQ8N6F7 178 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 SPERTQ8NA61 448 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 TEX47Q8TBZ9 253 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 RNF133Q8WVZ7 376 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 TMIGD2Q96BF3 282 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 OTULINQ96BN8 352 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 LYZL4Q96KX0 146 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 INTS14Q96SY0 518 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 C1orf21Q9H246 121 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 OR51V1Q9H2C8 321 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 FN3KRPQ9HA64 309 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 NOX4Q9NPH5 578 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 BRD7Q9NPI1 651 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 C1orf123Q9NWV4 160 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 PDP1Q9P0J1 537 aaPredicted RBP9.05□□□□□ -0.96
RNF4-212ENST00000509258 MMP24Q9Y5R2 645 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 WNK1Q9H4A3 2382 aa9.05□□□□□ -0.96
RNF4-212ENST00000509258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
RNF4-212ENST00000509258 TCRBV3S1A0A5B6 114 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 ARRDC5A6NEK1 342 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 AQP12BA6NM10 295 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 H3BN98 237 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 P2RY10O00398 339 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 TBX1O43435 398 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 KNG1P01042 644 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 LHBP01229 141 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 IFNGP01579 166 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 GYPAP02724 150 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 GRPP07492 148 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 SFTPBP07988 381 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 ACKR3P25106 362 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 POU1F1P28069 291 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 GSTT1P30711 240 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 OCLNQ16625 522 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 RUSC1-AS1Q66K80 236 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 C17orf107Q6ZR85 190 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 TRPM8Q7Z2W7 1104 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 FAM90A1Q86YD7 464 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 AQP12AQ8IXF9 295 aa9.04□□□□□ -0.96
RNF4-212ENST00000509258 TMEM86BQ8N661 226 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms