RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CBR3O75828 277 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ATG12O94817 140 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SCELO95171 688 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 GADD45GO95257 159 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NSA2O95478 260 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NDUFB10O96000 172 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SERPINA3P01011 423 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 IGHV2-5P01817 119 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 OPN1LWP04000 364 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 KLK3P07288 261 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 CA3P07451 260 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 STSP08842 583 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PVRP15151 417 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 RPA2P15927 270 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 GGT1P19440 569 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 RAB3BP20337 219 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PVALBP20472 110 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MAGP20916 626 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 IGFBP5P24593 272 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SDC4P31431 198 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 CCR7P32248 378 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 DLSTP36957 453 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PTGFRP43088 359 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 HTR5AP47898 357 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NUTF2P61970 127 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SKP1P63208 163 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 IL5RAQ01344 420 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 LIPEQ05469 1076 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 DOC2AQ14183 400 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 RCAN2Q14206 197 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 RAB35Q15286 201 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZIC1Q15915 447 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 DCAF4L1Q3SXM0 396 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PYCR3Q53H96 274 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SPIN4Q56A73 249 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MS4A13Q5J8X5 152 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF311Q5JNZ3 666 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TMEM31Q5JXX7 168 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 OLFML2AQ68BL7 652 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PAMR1Q6UXH9 720 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM122BQ7Z309 247 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 LHFPL4Q7Z7J7 247 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PAQR7Q86WK9 346 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ANGPTL5Q86XS5 388 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 GCNT2Q8N0V5 402 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF561Q8N587 486 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SPICQ8N5J4 248 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TRAM1L1Q8N609 369 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 C19orf18Q8NEA5 215 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NFAM1Q8NET5 270 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 OR8J3Q8NGG0 315 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 OR4A15Q8NGL6 344 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM110BQ8TC76 370 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF675Q8TD23 568 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 VN1R17PQ8TDU5 208 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TCTEX1D2Q8WW35 142 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SLC25A46Q96AG3 418 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TADA1Q96BN2 335 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 UPRTQ96BW1 309 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MALSU1Q96EH3 234 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TCEAL4Q96EI5 215 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PPP1R16AQ96I34 528 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 FCRL1Q96LA6 429 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SENP8Q96LD8 212 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 VSTM2LQ96N03 204 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 CCNL2Q96S94 520 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PFDN5Q99471 154 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 GPR22Q99680 433 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 C11orf70Q9BRQ4 267 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 COPS4Q9BT78 406 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 GABARAPL3Q9BY60 117 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MRPL37Q9BZE1 423 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TUBA4BQ9H853 241 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ISYNA1Q9NPH2 558 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NUDT15Q9NV35 164 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 B9D1Q9UPM9 204 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 VSIG4Q9Y279 399 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 NTNG1Q9Y2I2 539 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 EXOSC1Q9Y3B2 195 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 PCM1Q15154 2024 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF646O15015 1829 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 CACNA1SQ13698 1873 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 UBR2Q8IWV8 1755 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 NHSQ6T4R5 1651 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 A0A1B0GV90 55 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 A0A1B0GVY2 172 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM74A7A6NL05 159 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 G3V3Q6 166 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 H0YL77 283 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 M0QZK8 103 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 GPR171O14626 319 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 TCAPO15273 167 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 MPZL2O60487 215 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 TPST1O60507 370 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 HPGDSO60760 199 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 SDC3O75056 442 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 RDH16O75452 317 aa2.92□□□□□ -1.94
ECHDC1-217ENST00000488087 RAB3DO95716 219 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms