RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ANKRD30BLA7E2S9 258 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 CCNB2O95067 398 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 SOX14O95416 240 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 IGHV1-69P01742 117 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 ANXA2P07355 339 aaKnown RBP17.42■□□□□ 0.38
COL9A3-207ENST00000467819 SPI1P17947 270 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 MXRA7P84157 204 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 PDCD1Q15116 288 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 OLFML2AQ68BL7 652 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 ZNF770Q6IQ21 691 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-207ENST00000467819 CPLX4Q7Z7G2 160 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 PDZD9Q8IXQ8 264 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 LINC00471Q8N535 108 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 TMEM86BQ8N661 226 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 AQP11Q8NBQ7 271 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 OR4Q3Q8NH05 313 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 TRIM15Q9C019 465 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 ARMC1Q9NVT9 282 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 ATP6V1B2P21281 511 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 CX3CR1P49238 355 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 ELF3P78545 371 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-207ENST00000467819 EIF2B1Q14232 305 aaKnown RBP17.41■□□□□ 0.38
COL9A3-207ENST00000467819 PCK2Q16822 640 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 BRICD5Q6PL45 260 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 C16orf89Q6UX73 402 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 SLC16A9Q7RTY1 509 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 FGFRL1Q8N441 504 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 SCCPDHQ8NBX0 429 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 LRRC29Q8WV35 223 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 SSMEM1Q8WWF3 244 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 NMNAT2Q9BZQ4 307 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-207ENST00000467819 POMT1Q9Y6A1 747 aa17.41■□□□□ 0.38
COL9A3-207ENST00000467819 A0A1B0GW55 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DHRS12A0PJE2 317 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 NDUFA7O95182 113 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 LHBP01229 141 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L2P0CJ85 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L3P0CJ86 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L4P0CJ87 422 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L5P0CJ88 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L6P0CJ89 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L7P0CJ90 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 HSD11B1P28845 292 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DDOSTP39656 456 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 GRB2P62993 217 aaKnown RBP17.4■□□□□ 0.38
COL9A3-207ENST00000467819 FAM3AP98173 230 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 MIDNQ504T8 468 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 PDLIM3Q53GG5 364 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-207ENST00000467819 TEX30Q5JUR7 227 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 TEX36Q5VZQ5 186 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4L9Q6RFH8 374 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DPY19L4Q7Z388 723 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 WDR86Q86TI4 376 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 TBC1D15Q8TC07 691 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 SPSB4Q96A44 273 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 REEP6Q96HR9 211 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 VNN3Q9NY84 501 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DNAJC27Q9NZQ0 273 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 DUX4Q9UBX2 424 aa17.4■□□□□ 0.38
COL9A3-207ENST00000467819 A0A0U1RQK1 487 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 CLPSL1A2RUU4 121 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 ECDO95905 644 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-207ENST00000467819 IGHV4-59P01825 116 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 GRK5P34947 590 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 SLC15A1P46059 708 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 SLC25A1P53007 311 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 CSNK2BP67870 215 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 GFOD2Q3B7J2 385 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 C11orf53Q8IXP5 236 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 OR2T33Q8NG76 320 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 OR6N2Q8NGY6 317 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 CCL13Q99616 98 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 NDE1Q9NXR1 346 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 ACTR3BQ9P1U1 418 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 KAAG1Q9UBP8 84 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 RPUSD1Q9UJJ7 312 aaKnown RBP17.39■□□□□ 0.37
COL9A3-207ENST00000467819 BAIAP2Q9UQB8 552 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 U3KQV3 271 aa17.39■□□□□ 0.37
COL9A3-207ENST00000467819 IFNGP01579 166 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 MAGEA2P43356 314 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 MICBQ29980 383 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 WDR38Q5JTN6 314 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 FAM57BQ71RH2 274 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 VMO1Q7Z5L0 202 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 ERI1Q8IV48 349 aaKnown RBP17.38■□□□□ 0.37
COL9A3-207ENST00000467819 OR1M1Q8NGA1 313 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 DYRK2Q92630 601 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 SGK3Q96BR1 496 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 SEH1LQ96EE3 360 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 CCT8L2Q96SF2 557 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 TOR3AQ9H497 397 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 CNTD2Q9H8S5 307 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 MED20Q9H944 212 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 RNPEPL1Q9HAU8 725 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 BRD7Q9NPI1 651 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 ONECUT1Q9UBC0 465 aa17.38■□□□□ 0.37
COL9A3-207ENST00000467819 hCG_38984A0A1B0GV85 526 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms