RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 NUFIP1Q9UHK0 495 aaKnown RBP16.24■□□□□ 0.19
USP11-205ENST00000467378 PLSCR5A0PG75 271 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 IRGMA1A4Y4 181 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 LILRA1O75019 489 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 RPP14O95059 124 aaKnown RBP16.23■□□□□ 0.19
USP11-205ENST00000467378 IGHV1-46P01743 117 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 MT-ND5P03915 603 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 ADH4P08319 380 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 PIPP12273 146 aaPredicted RBP16.23■□□□□ 0.19
USP11-205ENST00000467378 DCKP27707 260 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 MAGEB1P43366 347 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 CYB5R2Q6BCY4 276 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 EGFL6Q8IUX8 553 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 BPIFB6Q8NFQ5 453 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 RORBQ92753 470 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 LYZL4Q96KX0 146 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 ALG8Q9BVK2 526 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 RGCCQ9H4X1 137 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 NKIRAS2Q9NYR9 191 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 CNOT2Q9NZN8 540 aaKnown RBP16.23■□□□□ 0.19
USP11-205ENST00000467378 PSORS1C1Q9UIG5 152 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 GNG8Q9UK08 70 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 DIMT1Q9UNQ2 313 aaKnown RBP16.23■□□□□ 0.19
USP11-205ENST00000467378 SNX5Q9Y5X3 404 aa16.23■□□□□ 0.19
USP11-205ENST00000467378 A0A096LNT2 108 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 A0A0U1RQV5 110 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 hCG_38984A0A1B0GV85 526 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 CD300LBA8K4G0 201 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 LOC110117498-PIK3R3F6TDL0 507 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 LMX1BO60663 402 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 LY6HO94772 140 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 IGLV3-1P01715 115 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 TTRP02766 147 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 TACSTD2P09758 323 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 LIMS3P0CW19 117 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 LIMS4P0CW20 117 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 ZNF16P17020 682 aaPredicted RBP16.22■□□□□ 0.19
USP11-205ENST00000467378 MVKQ03426 396 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 SNCBQ16143 134 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 IL17RELQ6ZVW7 336 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 CATSPERDQ86XM0 798 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 TMEM80Q96HE8 168 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 ZNF184Q99676 751 aaPredicted RBP16.22■□□□□ 0.19
USP11-205ENST00000467378 SLC30A2Q9BRI3 323 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 SOX7Q9BT81 388 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 RASSF4Q9H2L5 321 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 MOB1AQ9H8S9 216 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 ISG20L2Q9H9L3 353 aaKnown RBP16.22■□□□□ 0.19
USP11-205ENST00000467378 ACOXLQ9NUZ1 547 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 FKBP14Q9NWM8 211 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 OR52A1Q9UKL2 312 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 ZDHHC8Q9ULC8 765 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 TANC2Q9HCD6 1990 aa16.22■□□□□ 0.19
USP11-205ENST00000467378 A0A1B0GWJ7 208 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 EFCAB10A6NFE3 127 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 GGT3PA6NGU5 568 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 J3QLW9 94 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 KCNAB3O43448 404 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 SPRY3O43610 288 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 HPXP02790 462 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ERCC1P07992 297 aaPredicted RBP16.21■□□□□ 0.19
USP11-205ENST00000467378 ZNF19P17023 458 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 CFL1P23528 166 aaKnown RBP16.21■□□□□ 0.19
USP11-205ENST00000467378 PSMB10P40306 273 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ETV1P50549 477 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ACTA2P62736 377 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ACTG2P63267 376 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 CSNK2BP67870 215 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ST3GAL4Q11206 333 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 GFOD2Q3B7J2 385 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 PCGF3Q3KNV8 242 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ZMAT1Q5H9K5 638 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 CLEC2AQ6UVW9 174 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 FAM220AQ7Z4H9 259 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 ELMOD2Q8IZ81 293 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 SYS1Q8N2H4 156 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 BHLHE23Q8NDY6 225 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 MRPL48Q96GC5 212 aaKnown RBP16.21■□□□□ 0.19
USP11-205ENST00000467378 C4orf36Q96KX1 117 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 DIRC2Q96SL1 478 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 MYCBPQ99417 103 aaPredicted RBP16.21■□□□□ 0.19
USP11-205ENST00000467378 ZNF391Q9UJN7 358 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 SLC22A13Q9Y226 551 aa16.21■□□□□ 0.19
USP11-205ENST00000467378 SLC1A7O00341 560 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 NCR1O76036 304 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 CD55P08174 381 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 DDOSTP39656 456 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 GSK3AP49840 483 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 CCL8P80075 99 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 LOXL1Q08397 574 aaPredicted RBP16.2■□□□□ 0.18
USP11-205ENST00000467378 OR8B8Q15620 311 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 TSTQ16762 297 aaKnown RBP16.2■□□□□ 0.18
USP11-205ENST00000467378 FAM209AQ5JX71 171 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 FDX2Q6P4F2 183 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 PRSS35Q8N3Z0 413 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 OR56B2PQ8NGI1 322 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 OR13G1Q8NGZ3 307 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 OR51E1Q8TCB6 317 aa16.2■□□□□ 0.18
USP11-205ENST00000467378 SPRYD4Q8WW59 207 aaPredicted RBP16.2■□□□□ 0.18
USP11-205ENST00000467378 PELI1Q96FA3 418 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms