RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 CSO75390 466 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 EPPINO95925 133 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PTHP01270 115 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 STSP08842 583 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CT62P0C5K7 136 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FOSL2P15408 326 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MYL12AP19105 171 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TNNI3P19429 210 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 AADACP22760 399 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 S100A1P23297 94 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MMP11P24347 488 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CD1BP29016 333 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SHC1P29353 583 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 UGT2B10P36537 528 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TGFBR2P37173 567 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ALDH3B1P43353 468 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 OMPP47874 163 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 LMO4P61968 165 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 IGLV3-21P80748 117 aaPredicted RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CDK5Q00535 292 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SRSF5Q13243 272 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SCGB2A2Q13296 93 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TNK1Q13470 666 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 AQP6Q13520 282 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FAM53BQ14153 422 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 GINS1Q14691 196 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 EXOSC7Q15024 291 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FAM189A2Q15884 450 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 DEFB133Q30KQ1 61 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PGGHGQ32M88 737 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TRMT12Q53H54 448 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ARMCX4Q5H9R4 360 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SLC25A30Q5SVS4 291 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CLVS2Q5SYC1 327 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CCNJQ5T5M9 372 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MRPL2Q5T653 305 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 RNLSQ5VYX0 342 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TMEM236Q5W0B7 351 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SLC27A4Q6P1M0 643 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PAQR6Q6TCH4 344 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ZNF620Q6ZNG0 422 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 RASSF6Q6ZTQ3 369 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 OLIG3Q7RTU3 272 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ZNF550Q7Z398 422 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 HMGN2P46Q86SG4 172 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 C17orf82Q86X59 251 aaPredicted RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 GID4Q8IVV7 300 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 UBALD2Q8IYN6 164 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 DEFB119Q8N690 84 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 OR2T33Q8NG76 320 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 OR9A4Q8NGU2 314 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 NDNFQ8TB73 568 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FANK1Q8TC84 345 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ST7LQ8TDW4 575 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FAM222BQ8WU58 562 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 BCL2L2Q92843 193 aaPredicted RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TNFRSF14Q92956 283 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 RIT1Q92963 219 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 NXPE2Q96DL1 559 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FAM122AQ96E09 287 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ZHX1-C8orf76Q96EF9 292 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PLEKHA8Q96JA3 519 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ZNF285Q96NJ3 590 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TGM7Q96PF1 710 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 NEDD4LQ96PU5 975 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 SDF2Q99470 211 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ZNF559Q9BR84 538 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PYGO2Q9BRQ0 406 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 RNF121Q9H920 327 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ANKRA2Q9H9E1 313 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TMEM27Q9HBJ8 222 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 FAM60AQ9NP50 221 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CTPS2Q9NRF8 586 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 STARD5Q9NSY2 213 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MED17Q9NVC6 651 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 GPR83Q9NYM4 423 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TVP23BQ9NYZ1 205 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 NLGN3Q9NZ94 848 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 DNAJC27Q9NZQ0 273 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CCDC59Q9P031 241 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PRODH2Q9UF12 536 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MUTYHQ9UIF7 546 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 GMEB2Q9UKD1 530 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 ERGIC3Q9Y282 383 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MOB4Q9Y3A3 225 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 EXOSC1Q9Y3B2 195 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MMACHCQ9Y4U1 282 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CDH10Q9Y6N8 788 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TDRD6O60522 2096 aaKnown RBP3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CHD9Q3L8U1 2897 aa3.24□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 TRANK1O15050 2925 aa3.23□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 MN1Q10571 1320 aaPredicted RBP3.23□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 CHD7Q9P2D1 2997 aa3.23□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 A0A075B6Q4 140 aa3.23□□□□□ -1.89
NEGR1-IT1-201ENST00000453121 LOC390937A0A1W2PQ73 354 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms