RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 KPTNQ9Y664 436 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 A0A0G2JLM5 398 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ACOD1A6NK06 481 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 NPIPB9F8W1W9 429 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 H3BNX3 289 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 K7EPI3 171 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 AP3D1O14617 1153 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 BET1O15155 118 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 NDUFS6O75380 124 aaKnown RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SAP30O75446 220 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 GYPCP04921 128 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SERPINA5P05154 406 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 GFAPP14136 432 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 B4GALT1P15291 398 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 CHN1P15882 459 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 HTR2BP41595 481 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 INSL3P51460 131 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ARHGDIAP52565 204 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 XGP55808 180 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 RPP30P78346 268 aaKnown RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 TNFRSF9Q07011 255 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SKP2Q13309 424 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 CBFBQ13951 182 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 GSTA3Q16772 222 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF718Q3SXZ3 478 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 KCTD21Q4G0X4 260 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 LIPJQ5W064 366 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 HCP5Q6MZN7 132 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 CREB3L2Q70SY1 520 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 PAGE2Q7Z2X7 111 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 IGFN1Q86VF2 1251 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 CCDC28AQ8IWP9 274 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 KDM8Q8N371 416 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SLC25A40Q8TBP6 338 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 KLF14Q8TD94 323 aaPredicted RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ST8SIA1Q92185 356 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 OR2V2Q96R30 315 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 THUMPD3Q9BV44 507 aaKnown RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SF3B5Q9BWJ5 86 aaKnown RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 FAIM2Q9BWQ8 316 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 DGCR6LQ9BY27 220 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 OR2J1Q9GZK6 312 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 GORASP2Q9H8Y8 452 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SIAEQ9HAT2 523 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 PLGRKTQ9HBL7 147 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ACER3Q9NUN7 267 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 VNN3Q9NY84 501 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM181Q9P2C4 612 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 CYB5R1Q9UHQ9 305 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 ERGIC3Q9Y282 383 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 TRAPPC4Q9Y296 219 aa3.76□□□□□ -1.81
SDCBP-205ENST00000447267 RBMX2Q9Y388 322 aaKnown RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 SIRT4Q9Y6E7 314 aaPredicted RBP3.76□□□□□ -1.81
SDCBP-205ENST00000447267 RAB19A4D1S5 217 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 PSMB11A5LHX3 300 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 TRPC5OSA6NMA1 111 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF99A8MXY4 864 aaPredicted RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 M0R3G1 203 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CCRL2O00421 344 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ADAM20O43506 726 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 EIF1BO60739 113 aaKnown RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 IL3P08700 152 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 UBTFL6P0CB48 400 aaPredicted RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CCNOP22674 350 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 KCNJ1P48048 391 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 NPY4RP50391 375 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CLDN17P56750 224 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SLC35A1P78382 337 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 KCNJ10P78508 379 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ADARB1P78563 741 aaKnown RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CDK16Q00536 496 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ACSM1Q08AH1 577 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 GALEQ14376 348 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 AANATQ16613 207 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 DUSP5Q16690 384 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 FAM219BQ5XKK7 198 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 CARD17Q5XLA6 110 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM225Q6GV28 225 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ZYG11AQ6WRX3 759 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 RBM43Q6ZSC3 357 aaKnown RBP3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ADCK1Q86TW2 530 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF429Q86V71 674 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 MOGAT3Q86VF5 341 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SKA3Q8IX90 412 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SYCE1Q8N0S2 351 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 OSR2Q8N2R0 312 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ANKFN1Q8N957 763 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 OR6Y1Q8NGX8 325 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 LHFPL5Q8TAF8 219 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 RASSF5Q8WWW0 418 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ST8SIA4Q92187 359 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF566Q969W8 418 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ELP4Q96EB1 424 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 SLC29A1Q99808 456 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ACPTQ9BZG2 426 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 BCL2L14Q9BZR8 327 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 DERL2Q9GZP9 239 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 GLIPR2Q9H4G4 154 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 ELOVL6Q9H5J4 265 aa3.75□□□□□ -1.81
SDCBP-205ENST00000447267 EGLN3Q9H6Z9 239 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms