RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CPXM1Q96SM3 734 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 HCAR1Q9BXC0 346 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDCA4Q9BXL8 241 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 ARL6Q9H0F7 186 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 TKTL2Q9H0I9 626 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 NXF5Q9H1B4 397 aaKnown RBP4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC25A51Q9H1U9 297 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 TUBA4BQ9H853 241 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZDHHC11Q9H8X9 412 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 CLN6Q9NWW5 311 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 KLRF1Q9NZS2 232 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 B3GAT1Q9P2W7 334 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 RAB22AQ9UL26 194 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 CARHSP1Q9Y2V2 147 aaKnown RBP4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 EXOSC1Q9Y3B2 195 aaKnown RBP4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF115Q9Y4L5 304 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 BTAF1O14981 1849 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 TIAM2Q8IVF5 1701 aa4.15□□□□□ -1.75
HMGB3P9-201ENST00000441799 TNRC6CQ9HCJ0 1690 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A087X0K7 114 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A0G2JN53 185 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PNMA8CA0A1B0GUJ8 204 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1B0GUS0 222 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM269A0A1B0GVZ9 245 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM150BA6NC51 233 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF222A6NCQ9 220 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SHISA7A6NL88 538 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 A6NNC1 897 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF212BA8MTL3 300 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TCP10L2B9ZVM9 353 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 M0QZ24 198 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 WNT10BO00744 389 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PLPP3O14495 311 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PTGESO14684 152 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 YY2O15391 372 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ERI3O43414 337 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRKAB2O43741 272 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 CHST1O43916 411 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR7C2O60412 319 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 C1QL1O75973 258 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RAB36O95755 333 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TIMP1P01033 207 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MT-ND4LP03901 98 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 FABP3P05413 133 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SMIM17P0DL12 118 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR5H8P0DN80 308 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 AZGP1P25311 298 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 HTR1EP28566 365 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 EPHA2P29317 976 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 DAP3P51398 398 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 EFNA5P52803 228 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 FOXG1P55316 489 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RAB10P61026 200 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SNRPD1P62314 119 aaKnown RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SELENOWP63302 87 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 CAV1Q03135 178 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TRAF3Q13114 568 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ITPK1Q13572 414 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF234Q14588 700 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 PEA15Q15121 130 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 NPY5RQ15761 445 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 NEDD8Q15843 81 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 NRF1Q16656 503 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 LTC4SQ16873 150 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MS4A18Q3C1V0 323 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM69Q5SWH9 247 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 LDLRAD2Q5SZI1 272 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OTUD3Q5T2D3 398 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMEM78Q5T7P6 136 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 DCAF12L2Q5VW00 463 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 CST9Q5W186 159 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SP5Q6BEB4 398 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 CGB2Q6NT52 195 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TEX38Q6PEX7 206 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 LCTLQ6UWM7 567 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ENPP6Q6UWR7 440 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 WDR82Q6UXN9 313 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TPRG1Q6ZUI0 275 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 STRADAQ7RTN6 431 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF720Q7Z2F6 126 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMPRSS11BQ86T26 416 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 UBALD2Q8IYN6 164 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC22A15Q8IZD6 547 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF444Q8N0Y2 327 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF664Q8N3J9 261 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MS4A15Q8N5U1 240 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR4D11Q8NGI4 311 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR9I1Q8NGQ6 314 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR2T4Q8NH00 348 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 CANT1Q8WVQ1 401 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RAB8BQ92930 207 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPEQ96AT9 228 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 C10orf35Q96D05 121 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RCN3Q96D15 328 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 SMIM19Q96E16 107 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RCHY1Q96PM5 261 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RNF157Q96PX1 679 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 RASL10BQ96S79 203 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYADMQ96S97 322 aa4.14□□□□□ -1.75
HMGB3P9-201ENST00000441799 ATOH8Q96SQ7 321 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms