RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 DDOSTP39656 456 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 RPS7P62081 194 aaKnown RBP7.75□□□□□ -1.17
NUP50-206ENST00000422489 CBX1P83916 185 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 GK3PQ14409 553 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 KCNJ8Q15842 424 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 PCK2Q16822 640 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 LINC01590Q5TEZ4 76 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 TMEM236Q5W0B7 351 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 WDR25Q64LD2 544 aaPredicted RBP7.75□□□□□ -1.17
NUP50-206ENST00000422489 SLC16A9Q7RTY1 509 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 TRPM8Q7Z2W7 1104 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 CPOQ8IVL8 374 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 HS3ST5Q8IZT8 346 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 PARP8Q8N3A8 854 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 Q8TCH9 128 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 BCAS4Q8TDM0 211 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 REEP6Q96HR9 211 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 AMELYQ99218 206 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 OR10A2Q9H208 303 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 TOR3AQ9H497 397 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 YY1AP1Q9H869 796 aa7.75□□□□□ -1.17
NUP50-206ENST00000422489 TRAV38-1A0A0B4J264 116 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 SELENOFO60613 162 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 FKBP6O75344 327 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 LYNP07948 512 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 ANXA8P13928 327 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 PRTN3P24158 256 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 NAA10P41227 235 aaPredicted RBP7.74□□□□□ -1.17
NUP50-206ENST00000422489 MTNR1AP48039 350 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 GSK3AP49840 483 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 HCCSP53701 268 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 ZNF121P58317 390 aaPredicted RBP7.74□□□□□ -1.17
NUP50-206ENST00000422489 GMFBP60983 142 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 FGF12P61328 243 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 FAM3AP98173 230 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 PAX2Q02962 417 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 FLOT2Q14254 428 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 DNAL1Q4LDG9 190 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 CD276Q5ZPR3 534 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 ZNF841Q6ZN19 808 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 DOK3Q7L591 496 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 TIGD4Q8IY51 512 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 RNF133Q8WVZ7 376 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 TEX12Q9BXU0 123 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 OPA3Q9H6K4 179 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 PPP1R3EQ9H7J1 279 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 TNFRSF19Q9NS68 423 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 TVP23BQ9NYZ1 205 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 ZNF319Q9P2F9 582 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 RHBDD3Q9Y3P4 386 aa7.74□□□□□ -1.17
NUP50-206ENST00000422489 SVEP1Q4LDE5 3571 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 TRAV40A0A0B4J280 105 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 ARRDC5A6NEK1 342 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 OOEPA6NGQ2 149 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 DNAJC9-AS1A6NH13 148 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 CDIPTO14735 213 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 PHYHO14832 338 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 NDUFA2O43678 99 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 ENSAO43768 121 aaKnown RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 DNAJC8O75937 253 aaPredicted RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 FSTL3O95633 263 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 HOXB6P17509 224 aaKnown RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 CFL1P23528 166 aaKnown RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 PSMB10P40306 273 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 OPRL1P41146 370 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 CDK5Q00535 292 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 SNAPC1Q16533 368 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 BRD3OSQ6XYD6 125 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 KCTD8Q6ZWB6 473 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 KRT77Q7Z794 578 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 GCSAMQ8N6F7 178 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 BBS1Q8NFJ9 593 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 OR1M1Q8NGA1 313 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 OR52H1Q8NGJ2 320 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 LRRC29Q8WV35 223 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 PIGCQ92535 297 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 SPSB4Q96A44 273 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 UPRTQ96BW1 309 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 HIST1H2AAQ96QV6 131 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 CCL13Q99616 98 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 MICU1Q9BPX6 476 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 PAPOLGQ9BWT3 736 aaKnown RBP7.73□□□□□ -1.17
NUP50-206ENST00000422489 MARCH7Q9H992 704 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 TRIM36Q9NQ86 728 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 KIF17Q9P2E2 1029 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 CTSZQ9UBR2 303 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 DNAJB9Q9UBS3 223 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 POMPQ9Y244 141 aa7.73□□□□□ -1.17
NUP50-206ENST00000422489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.178e-12■■■■□ 24.5
NUP50-206ENST00000422489 hCG_38984A0A1B0GV85 526 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 MDFIC2A0A1B0GVS7 189 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 ANXA2P2A6NMY6 339 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 ZNF850A8MQ14 1090 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 C22orf46C9J442 243 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 PSMD9O00233 223 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 DVL1O14640 695 aa7.72□□□□□ -1.17
NUP50-206ENST00000422489 GSC2O15499 205 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms