RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TCEANCQ8N8B7 351 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 OR5A2Q8NGI9 324 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 OR8S1Q8NH09 359 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ZNF671Q8TAW3 534 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ITLN1Q8WWA0 313 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ZNRF4Q8WWF5 429 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 LRTOMTQ8WZ04 291 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 NEIL1Q96FI4 390 aaPredicted RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 PGAM5Q96HS1 289 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 OR8B4Q96RC9 309 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 CNN2Q99439 309 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 MICU1Q9BPX6 476 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 HIF1ANQ9NWT6 349 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 RASL12Q9NYN1 266 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 TREM2Q9NZC2 230 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 KAAG1Q9UBP8 84 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ZNF469Q96JG9 3925 aaPredicted RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 VPS13CQ709C8 3753 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 TEP1Q99973 2627 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 C2CD3Q4AC94 2353 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 MALRD1Q5VYJ5 2156 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 MLNRO43193 412 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 TBX1O43435 398 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 PLPP2O43688 288 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 SERPINA3P01011 423 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 LHBP01229 141 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ALPLP05186 524 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 KRT8P05787 483 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ANXA2P07355 339 aaKnown RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 CLUP10909 449 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 CA6P23280 308 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ATP6V1E1P36543 226 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 SRP14P37108 136 aaKnown RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 GSK3AP49840 483 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ZNF121P58317 390 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 ACTC1P68032 377 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ACTA1P68133 377 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 RIPPLY1Q0D2K3 151 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 MAB21L1Q13394 359 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 TRIP10Q15642 601 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ZNF404Q494X3 552 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 KLHL22Q53GT1 634 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 GLYATL3Q5SZD4 288 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ATPAF1Q5TC12 328 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 LPCAT4Q643R3 524 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 BTNL3Q6UXE8 466 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 AMIGO2Q86SJ2 522 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 HS3ST5Q8IZT8 346 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 TBC1D15Q8TC07 691 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 STMN2Q93045 179 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ZMYND19Q96E35 227 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 MED30Q96HR3 178 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 REEP6Q96HR9 211 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 SIGLEC11Q96RL6 698 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 IL4I1Q96RQ9 567 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 CIB1Q99828 191 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ADAT1Q9BUB4 502 aaKnown RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 MRI1Q9BV20 369 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 RTL8AQ9BWD3 113 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 NEK6Q9HC98 313 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 G6PC2Q9NQR9 355 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 IMPAD1Q9NX62 359 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 ERVK-18Q9QC07 812 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 OR5V1Q9UGF6 321 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 NUFIP1Q9UHK0 495 aaKnown RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 OAZ3Q9UMX2 235 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 SNX5Q9Y5X3 404 aa5.38□□□□□ -1.55
USP54-202ENST00000413442 NSD1Q96L73 2696 aaPredicted RBP5.38□□□□□ -1.55
USP54-202ENST00000413442 SETD2Q9BYW2 2564 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 ZNF816-ZNF321PA0A0X1KG74 233 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 KIR2DS1A0A191URI9 304 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 hCG_38984A0A1B0GV85 526 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 IRGMA1A4Y4 181 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ISPDA4D126 451 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 METTL15A6NJ78 407 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 OR5B21A6NL26 309 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 FAM157AC9JC47 383 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 F5H5P2 479 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 LGALS8O00214 317 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 DLGAP1O14490 977 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 SLC16A6O15403 523 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 TCF21O43680 179 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 PRKYO43930 277 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 IGLV3-1P01715 115 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 ZNF16P17020 682 aaPredicted RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 PSMB10P40306 273 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 MTNR1AP48039 350 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 CCR9P51686 369 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 GNB2P62879 340 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 GNG3P63215 75 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 KPNB1Q14974 876 aaKnown RBP5.37□□□□□ -1.55
USP54-202ENST00000413442 ZMYND11Q15326 602 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 MICBQ29980 383 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 SNAI3Q3KNW1 292 aa5.37□□□□□ -1.55
USP54-202ENST00000413442 CEACAM21Q3KPI0 293 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms