RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SIGLEC11Q96RL6 698 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 RASL11BQ9BPW5 248 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 TREM2Q9NZC2 230 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 GMPR2Q9P2T1 348 aaKnown RBP4.48□□□□□ -1.69
SCN3A-203ENST00000409101 FOXD3Q9UJU5 478 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-203ENST00000409101 EVPLQ92817 2033 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 TRBV23-1A0A0A0MS06 115 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 RAB7AP51149 207 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 MESP2Q0VG99 397 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 FBXW9Q5XUX1 488 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 LGI3Q8N145 548 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF721Q8TF20 911 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 ST8SIA2Q92186 375 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 ADAM19Q9H013 955 aa4.48□□□□□ -1.69
SCN3A-203ENST00000409101 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 A0A1W2PR77 199 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 HMX2A2RU54 273 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 F6UZH7 168 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 DNASE2O00115 360 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 OR4A8P0C604 315 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 OR10J4P0C629 311 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SLC37A1P57057 533 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 HIKESHIQ53FT3 197 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 BEX5Q5H9J7 111 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 OR6X1Q8NH79 312 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ASB10Q8WXI3 467 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 MALSU1Q96EH3 234 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SLC25A37Q9NYZ2 338 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 RCE1Q9Y256 329 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 HSPB11Q9Y547 144 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 AQP7P3A6NL99 342 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ADRA2AP08913 450 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ALDH3B1P43353 468 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CTU2Q2VPK5 515 aaKnown RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 OTPQ5XKR4 325 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 C9orf40Q8IXQ3 194 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 RBMXL1Q96E39 390 aaKnown RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ZC3H10Q96K80 434 aaKnown RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 TSPAN32Q96QS1 320 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 PDCD1LG2Q9BQ51 273 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 GPR35Q9HC97 309 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CACFD1Q9UGQ2 172 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 A0A0B4J203 849 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ARRDC5A6NEK1 342 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 M0QYG6 137 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 TMPRSS2O15393 492 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 NME2P1O60361 137 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CST2P09228 141 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 NME2P22392 152 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 PPT1P50897 306 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 BPIFB3P59826 476 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SKP2Q13309 424 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 GK2Q14410 553 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 TMEM251Q8N6I4 163 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 C17orf47Q8NEP4 570 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 WNT2BQ93097 391 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SFXN3Q9BWM7 321 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 GABARAPL1Q9H0R8 117 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 GPATCH2Q9NW75 528 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ELOVL5Q9NYP7 299 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CISD1Q9NZ45 108 aaKnown RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 PRDM4Q9UKN5 801 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 RNF150Q9ULK6 438 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 KLK4Q9Y5K2 254 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 TCHHQ07283 1943 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 A0A1W2PQM1 296 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 LIPT2A6NK58 231 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CHATP28329 748 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CSF2RBP32927 897 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 KIR2DS2P43631 304 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 FMODQ06828 376 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ACSM1Q08AH1 577 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CCDC71Q8IV32 467 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SFTPA2Q8IWL1 248 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ABHD3Q8WU67 409 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF2Q9BSG1 426 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-203ENST00000409101 PTDSS2Q9BVG9 487 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 MLXQ9UH92 298 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 LRP12Q9Y561 859 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 A0A1W2PPV9 198 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 C9orf172C9J069 976 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 K7EPK0 472 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CYR61O00622 381 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 NGFP01138 241 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 CELA2AP08217 269 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 OMGP23515 440 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 AKR1D1P51857 326 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 UBE2G2P60604 165 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF674Q2M3X9 581 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 FAM58AQ8N1B3 248 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 SYS1Q8N2H4 156 aa4.47□□□□□ -1.69
SCN3A-203ENST00000409101 FAM71E2Q8N5Q1 922 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms