RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 NMES1Q9C002 83 aa15.22■□□□□ 0.03
PTPRA-205ENST00000399903 CNTD2Q9H8S5 307 aa15.22■□□□□ 0.03
PTPRA-205ENST00000399903 CRLF2Q9HC73 371 aa15.22■□□□□ 0.03
PTPRA-205ENST00000399903 FAM60AQ9NP50 221 aa15.22■□□□□ 0.03
PTPRA-205ENST00000399903 RCL1Q9Y2P8 373 aaKnown RBP15.22■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF726A6NNF4 738 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 MPIG6BO95866 241 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 RNH1P13489 461 aaKnown RBP15.21■□□□□ 0.03
PTPRA-205ENST00000399903 OR3A2P47893 321 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 SCAND1P57086 179 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 C1QL3Q5VWW1 255 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 AWAT2Q6E213 333 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 PTCRAQ6ISU1 281 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-205ENST00000399903 CBLN3Q6UW01 205 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 SPNS3Q6ZMD2 512 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 APCDD1LQ8NCL9 501 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 RERGQ96A58 199 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-205ENST00000399903 LRFN5Q96NI6 719 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 STACQ99469 402 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 CNTNAP3Q9BZ76 1288 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF576Q9H609 170 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 SDHAF3Q9NRP4 125 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 ZDHHC8Q9ULC8 765 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 LOC107986453A0A1B0GWG9 222 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 DMWDQ09019 674 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 TMEM128Q5BJH2 165 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 FHL5Q5TD97 284 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 OTOSQ8NHW6 89 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 FLVCR1-AS1Q8TAF5 88 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 FLVCR1Q9Y5Y0 555 aa15.21■□□□□ 0.03
PTPRA-205ENST00000399903 UNC13CQ8NB66 2214 aa15.21■□□□□ 0.02
PTPRA-205ENST00000399903 LOC101059948A0A1B0GTJ6 334 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
PTPRA-205ENST00000399903 PNLDC1Q8NA58 520 aaKnown RBP15.2■□□□□ 0.02
PTPRA-205ENST00000399903 OR1J1Q8NGS3 322 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 MYOZ1Q9NP98 299 aaPredicted RBP15.2■□□□□ 0.02
PTPRA-205ENST00000399903 WIPF3A6NGB9 483 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 C17orf51A8MQB3 221 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 RAB27BO00194 218 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 PHOX2AO14813 284 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 CTSEP14091 401 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 RBP2P50120 134 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 SULT1A2P50226 295 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 TMEM33P57088 247 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 SLC18B1Q6NT16 456 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 EXD3Q8N9H8 876 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 MR1Q95460 341 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 OR8B4Q96RC9 309 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 OPA3Q9H6K4 179 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 PTGES2Q9H7Z7 377 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 PPP4R1LQ9P1A2 415 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 HEBP2Q9Y5Z4 205 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 ATXN7O15265 892 aaPredicted RBP15.2■□□□□ 0.02
PTPRA-205ENST00000399903 THEGLP0DJG4 465 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 AKT2P31751 481 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 EMP2P54851 167 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 ZNF74Q16587 644 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 OR52N4Q8NGI2 321 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 BSCL2Q96G97 398 aaPredicted RBP15.2■□□□□ 0.02
PTPRA-205ENST00000399903 CDC6Q99741 560 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 C5orf66Q9H5L9 145 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 SLC17A5Q9NRA2 495 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 HHLA2Q9UM44 414 aa15.2■□□□□ 0.02
PTPRA-205ENST00000399903 IGKV1D-42A0A075B6H8 117 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 IFITM10A6NMD0 228 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 IGHV4-34P06331 123 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 JMJD7P0C870 316 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 CD37P11049 281 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 HLA-GP17693 338 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 ZNF10P21506 573 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 SOHLH1Q5JUK2 328 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 OR9A4Q8NGU2 314 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 TERB2Q8NHR7 220 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 FAM213BQ8TBF2 198 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 KLHDC3Q9BQ90 382 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 CCDC3Q9BQI4 270 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 TNRC18O15417 2968 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 EGR3Q06889 387 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 PNLIPRP3Q17RR3 467 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 ZNF260Q3ZCT1 412 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 GKN2Q86XP6 184 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 S100A13Q99584 98 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 LRP12Q9Y561 859 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 A6NCN8 305 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 SERINC4A6NH21 518 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 TSTD3H0UI37 97 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 PPP1R2P9O14990 202 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 XRCC2O43543 280 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 AMY2BP19961 511 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 NKX6-1P78426 367 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 TOMM34Q15785 309 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 EEF1A1P5Q5VTE0 462 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 CDCP2Q5VXM1 449 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 SMRP1Q8NCR6 262 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 SCARF2Q96GP6 870 aaPredicted RBP15.19■□□□□ 0.02
PTPRA-205ENST00000399903 Q9N2J8 555 aa15.19■□□□□ 0.02
PTPRA-205ENST00000399903 CA14Q9ULX7 337 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms