RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SSX5O60225 188 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 RGS11O94810 467 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 LPLP06858 475 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 NR4A1P22736 598 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 DTYMKP23919 212 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 CBX5P45973 191 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 ART1P52961 327 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 FAM3AP98173 230 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 ARL6IP1Q15041 203 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 ACSF3Q4G176 576 aaPredicted RBP4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 ACTBL2Q562R1 376 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 GLT8D1Q68CQ7 371 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 INO80CQ6PI98 192 aaPredicted RBP4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 Q6ZT83 130 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 NAA40Q86UY6 237 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 RBMXL3Q8N7X1 1067 aaKnown RBP4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 SLC7A6Q92536 515 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 SEH1LQ96EE3 360 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 FOXB1Q99853 325 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 LINC00574Q9H8X3 128 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 DHDHQ9UQ10 334 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 KCNK7Q9Y2U2 307 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 LIPGQ9Y5X9 500 aa4.65□□□□□ -1.66
PRPF4B-201ENST00000337659 A0A0C4DFX4 3053 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 GNB5O14775 395 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 CD8AP01732 235 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 HTR2CP28335 458 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 CLDN17P56750 224 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 RPS7P62081 194 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 SLC3A1Q07837 685 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 RAB11BQ15907 218 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 KRTCAP3Q53RY4 240 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 ZNF774Q6NX45 483 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 LHFPL2Q6ZUX7 228 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 CELF2-AS1Q8N7Q2 184 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 TMEM185AQ8NFB2 350 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 PRR7Q8TB68 274 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 SMAP2Q8WU79 429 aaPredicted RBP4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 FAM3DQ96BQ1 224 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 SRA1Q9HD15 236 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 KIF26BQ2KJY2 2108 aa4.65□□□□□ -1.67
PRPF4B-201ENST00000337659 MEIKINA0A087WXM9 373 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 ZNF503-AS2A6NEH8 195 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 TVP23AA6NH52 213 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 IQCF6A8MYZ5 107 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 H3BUI4 141 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 VSIG8P0DPA2 414 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 ZNF823P16415 610 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 POU3F2P20265 443 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 PEX19P40855 299 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 LSM3P62310 102 aaKnown RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 IL15RAQ13261 267 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 C2orf76Q3KRA6 126 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 OR2A2Q6IF42 318 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 NRARPQ7Z6K4 114 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 WDR31Q8NA23 367 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 OR4D6Q8NGJ1 314 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 OR6K6Q8NGW6 343 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 AKAP1Q92667 903 aaKnown RBP eCLIP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SCNM1Q9BWG6 230 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SLITRK2Q9H156 845 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 HRASLSQ9HDD0 168 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 MRPL15Q9P015 296 aaKnown RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 EXTL2Q9UBQ6 330 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 NCOR2Q9Y618 2525 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 ZDBF2Q9HCK1 2354 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 FIGNL2A6NMB9 653 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 WDR1O75083 606 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 GSTT2BP0CG30 244 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 CDK2P24941 298 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 LMO1P25800 156 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 OTX2P32243 289 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 ATP6V1E1P36543 226 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 PSMB10P40306 273 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 UCP3P55916 312 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 AP3S2P59780 193 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SEC61A1P61619 476 aaKnown RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SF3B4Q15427 424 aaKnown RBP eCLIP4.64□□□□□ -1.673e-8■■■■□ 26
PRPF4B-201ENST00000337659 GABRA6Q16445 453 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 FBXW9Q5XUX1 488 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 ZNF626Q68DY1 528 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 FAM90A1Q86YD7 464 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SKA3Q8IX90 412 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 LRTM2Q8N967 370 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 DEFB124Q8NES8 71 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 OR56B4Q8NH76 319 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 CPNE2Q96FN4 548 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 CHST6Q9GZX3 395 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 HIPK2Q9H2X6 1198 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 PIGMQ9H3S5 423 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SEC61A2Q9H9S3 476 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 FAM212BQ9NTI7 297 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 TAS2R4Q9NYW5 299 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 NCOA6Q14686 2063 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 TRBV6-7A0A0A0MS04 114 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 TMEM269A0A1B0GVZ9 245 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SSX4O60224 188 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 CELA3AP09093 270 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 H2BFMP0C1H6 154 aa4.64□□□□□ -1.67
PRPF4B-201ENST00000337659 SLC2A2P11168 524 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms