RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FOXI3A8MTJ6 420 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 H0YGG7 62 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 BCKDKO14874 412 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LRRTM2O43300 516 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CCNB2O95067 398 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 HMGN2P05204 90 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 IGFBP1P08833 259 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 PPIAL4GP0DN37 164 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ETS2P15036 469 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 HAAOP46952 286 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CDK9P50750 372 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LIM2P55344 173 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 GABARAPL2P60520 117 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CXCR4P61073 352 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 STK11Q15831 433 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 NDUFA9Q16795 377 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 DUSP7Q16829 419 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MICAQ29983 383 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 C17orf58Q2M2W7 97 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CNPY1Q3B7I2 92 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZBED5Q49AG3 693 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 C14orf177Q52M58 125 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF691Q5VV52 312 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ACSM5Q6NUN0 579 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 FAHD1Q6P587 224 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TMEM123Q8N131 208 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LRRC25Q8N386 305 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LINC00471Q8N535 108 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OR56B2PQ8NGI1 322 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 FNDC8Q8TC99 324 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 PHF10Q8WUB8 498 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 PATE1Q8WXA2 126 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 NR4A3Q92570 626 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 UCN3Q969E3 161 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF681Q96N22 645 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 COL21A1Q96P44 957 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MBOAT4Q96T53 435 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CHCHD5Q9BSY4 110 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 COMMD4Q9H0A8 199 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MAGT1Q9H0U3 335 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TCEAL2Q9H3H9 227 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 UCK1Q9HA47 277 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ANKHQ9HCJ1 492 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CTSZQ9UBR2 303 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 RSL24D1Q9UHA3 163 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 POFUT2Q9Y2G5 429 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 SLC22A7Q9Y694 548 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 DOCK9Q9BZ29 2069 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MKI67P46013 3256 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 A0A1B0GTH9 108 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ARRDC5A6NEK1 342 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 C11orf98E9PRG8 122 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 H3BSA7 217 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CASC3O15234 703 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 AQP9O43315 295 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 MRPS14O60783 128 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OXSR1O95747 527 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 GPR75O95800 540 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 F10P00742 488 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OPN1LWP04000 364 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 S100A6P06703 90 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 IL9P15248 144 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CRHBPP24387 322 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ELK4P28324 431 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 XCR1P46094 333 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 YAP1P46937 504 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CXCL12P48061 93 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ALDH3B2P48448 385 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 C21orf59P57076 290 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 NUP107P57740 925 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 VSX2P58304 361 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 HPCAP84074 193 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CD47Q08722 323 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 SYPL1Q16563 259 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZC2HC1BQ5TFG8 222 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 FRMPD2BQ6IN97 320 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF773Q6PK81 442 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TMEM107Q6UX40 140 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF497Q6ZNH5 498 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 C16orf62Q7Z3J2 963 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 UBALD2Q8IYN6 164 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 Q8N377 158 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ARL14Q8N4G2 192 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 DEFB119Q8N690 84 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CSNK1A1LQ8N752 337 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OR10G2Q8NGC3 310 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OR5L2Q8NGL0 311 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 OR9A2Q8NGT5 310 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LMX1AQ8TE12 382 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 SPRYD4Q8WW59 207 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TMIGD2Q96BF3 282 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 TRNT1Q96Q11 434 aaKnown RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 CDX2Q99626 313 aaPredicted RBP3.2□□□□□ -1.9
SMCO3-201ENST00000316048 UQCC2Q9BRT2 126 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 LRRC61Q9BV99 259 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 ACER3Q9NUN7 267 aa3.2□□□□□ -1.9
SMCO3-201ENST00000316048 GIN1Q9NXP7 522 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms