RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ARHGAP5-AS1Q96IT6 56 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 CCNL2Q96S94 520 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-202ENST00000310645 MAP3K3Q99759 626 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 OCSTAMPQ9BR26 566 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-202ENST00000310645 SOX7Q9BT81 388 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 EHFQ9NZC4 300 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL6A2-202ENST00000310645 A0A0A6YYD4 124 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 LOC390937A0A1W2PQ73 354 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 A6NCN8 305 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 H0YIG0 161 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 CRTAPO75718 401 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-202ENST00000310645 CST4P01036 141 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 MPZP25189 248 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 DHPSP49366 369 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-202ENST00000310645 P2RY4P51582 365 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 SGCBQ16585 318 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 ZNF519Q8TB69 540 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 MED12Q93074 2177 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 PARP11Q9NR21 331 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 CLDN16Q9Y5I7 305 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
COL6A2-202ENST00000310645 IGKV1D-43A0A0B4J1Z2 117 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 BPNT1O95861 308 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 ZNF20P17024 532 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 SULT1A1P50225 295 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 KLHL24Q6TFL4 600 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 OR13G1Q8NGZ3 307 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 OR51E1Q8TCB6 317 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 NPRL2Q8WTW4 380 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 GGACTQ9BVM4 153 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 LPAR5Q9H1C0 372 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 MED29Q9NX70 200 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 MRPS28Q9Y2Q9 187 aaKnown RBP13.03□□□□□ -0.32
COL6A2-202ENST00000310645 FAM157AC9JC47 383 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 GLI4P10075 376 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 PRF1P14222 555 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 ZNF708P17019 499 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 IL12BP29460 328 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 CAMLGP49069 296 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 NOGQ13253 232 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 ZNF248Q8NDW4 579 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 OR5D14Q8NGL3 314 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 EMC6Q9BV81 110 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 PLA2G2FQ9BZM2 168 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 PCOLCE2Q9UKZ9 415 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 MEMO1Q9Y316 297 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 MMP24Q9Y5R2 645 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 MUC22E2RYF6 1773 aaPredicted RBP13.03□□□□□ -0.32
COL6A2-202ENST00000310645 TMED7-TICAM2A0A0A6YYA0 188 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 TTRP02766 147 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 GUSBP08236 651 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 HCKP08631 526 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 HSD11B1P28845 292 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 CRABP1P29762 137 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
COL6A2-202ENST00000310645 OR3A4PP47883 348 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 QRFPP83859 136 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 TOLLIPQ9H0E2 274 aa13.03□□□□□ -0.32
COL6A2-202ENST00000310645 PMS2P1A4D2B8 440 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 C2orf72A6NCS6 295 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 WRBO00258 174 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 IL33O95760 270 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 IFNA2P01563 188 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 IGHV2-5P01817 119 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 NDUFA6P56556 154 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 KIAA0141Q14154 515 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 LYPD6Q86Y78 171 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 SLC26A10Q8NG04 563 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 ZNF775Q96BV0 537 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 JSRP1Q96MG2 331 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.32
COL6A2-202ENST00000310645 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.32
COL6A2-202ENST00000310645 TBPP20226 339 aa13.02□□□□□ -0.33
COL6A2-202ENST00000310645 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
COL6A2-202ENST00000310645 OR5B2Q96R09 309 aa13.02□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM59Q9BXS4 323 aa13.02□□□□□ -0.33
COL6A2-202ENST00000310645 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.33
COL6A2-202ENST00000310645 TAAR5O14804 337 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 KLK3P07288 261 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 FBP1P09467 338 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM50BP56557 158 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 PDZD11Q5EBL8 140 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 OR10H5Q8NGA6 315 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms