RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZCCHC4Q9H5U6 513 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 V9GYS6 101 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 PRR14LQ5THK1 2151 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 ANKRD61A6NGH8 418 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 LMX1BO60663 402 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 FAM3AP98173 230 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 SNTB1Q13884 538 aaKnown RBP16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 LINC01560Q8TB33 94 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 GFI1Q99684 422 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 OPA3Q9H6K4 179 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 SMURF1Q9HCE7 757 aa16.3■□□□□ 0.2
PDLIM3-202ENST00000284770 TRAV8-7A0A075B6U6 113 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 hCG_38984A0A1B0GV85 526 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 TUBAL3A6NHL2 446 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 DHRS7CA6NNS2 312 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 CTDSP2O14595 271 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 PPP1CBP62140 327 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 SFXN4Q6P4A7 337 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 LRRTM1Q86UE6 522 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 C1orf174Q8IYL3 243 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 PARP16Q8N5Y8 322 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 FGGYQ96C11 551 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 BCL2L14Q9BZR8 327 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 POFUT1Q9H488 388 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 AKIP1Q9NQ31 210 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 NPDC1Q9NQX5 325 aaPredicted RBP16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 PTTG3PQ9NZH4 202 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 FAM208BQ5VWN6 2430 aa16.29■□□□□ 0.2
PDLIM3-202ENST00000284770 EPXP11678 715 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 ADRA2CP18825 462 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 TUBG1P23258 451 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 GSK3AP49840 483 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 HLXQ14774 488 aaPredicted RBP16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 OR8B8Q15620 311 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 PGAP1Q75T13 922 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 SERPINA12Q8IW75 414 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 SEMA6DQ8NFY4 1073 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 OR1J1Q8NGS3 322 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 AP3S1Q92572 193 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 ADAT3Q96EY9 351 aaPredicted RBP16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 SLC30A2Q9BRI3 323 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 PLEKHA1Q9HB21 404 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 TCF7L1Q9HCS4 588 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 TUBG2Q9NRH3 451 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 PEX16Q9Y5Y5 336 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 CHD6Q8TD26 2715 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 DPRXA6NFQ7 191 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 FSTP19883 344 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 THBS2P35442 1172 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 MAP2K3P46734 347 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 TNK1Q13470 666 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 MRPL21Q7Z2W9 205 aaKnown RBP16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 CROCCP3Q8IVE0 287 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 ZFAND2BQ8WV99 257 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 ITFG2Q969R8 447 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 C10orf35Q96D05 121 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 OR2J1Q9GZK6 312 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 PIGLQ9Y2B2 252 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 SPEF1Q9Y4P9 236 aa16.28■□□□□ 0.2
PDLIM3-202ENST00000284770 WIPF3A6NGB9 483 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 A6NIN4 97 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 NOTOA8MTQ0 251 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 PYCARD-AS1I3L0S3 204 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 BMP4P12644 408 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 ZNF20P17024 532 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 IGFBP3P17936 291 aaPredicted RBP16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 ACKR3P25106 362 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 ERVS71-1P61550 626 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 BSPH1Q075Z2 132 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 RIPPLY1Q0D2K3 151 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 SPATA46Q5T0L3 261 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 FBXW12Q6X9E4 464 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 MFSD4AQ8N468 514 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 OR5D14Q8NGL3 314 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 SLITRK2Q9H156 845 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 CKLFQ9UBR5 152 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 FOXJ3Q9UPW0 622 aa16.27■□□□□ 0.2
PDLIM3-202ENST00000284770 PDCD5O14737 125 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 PRSS12P56730 875 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 SPOCK1Q08629 439 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 SLC25A40Q8TBP6 338 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 ESRP2Q9H6T0 727 aaKnown RBP16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 FAHP16930 419 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 ATF1P18846 271 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 S100A5P33763 92 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 GNALP38405 381 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 IDNKQ5T6J7 187 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 S100ZQ8WXG8 99 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 KCTD12Q96CX2 325 aaKnown RBP16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 MARS2Q96GW9 593 aaKnown RBP16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 MIXL1Q9H2W2 232 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
PDLIM3-202ENST00000284770 HCFC1P51610 2035 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 GGT3PA6NGU5 568 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 CLDN25C9JDP6 229 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 ATP6V1G2-DDX39BF2Z307 99 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 ABCD4O14678 606 aa16.25■□□□□ 0.19
PDLIM3-202ENST00000284770 SLC2A2P11168 524 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms