RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 A8MXE2 369 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 CLDN25C9JDP6 229 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 AIPO00170 330 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 MTRF1O75570 445 aaKnown RBP18.03■□□□□ 0.48
PNKP-203ENST00000593946 ZNF20P17024 532 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 CCNOP22674 350 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 DDOSTP39656 456 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 PSMD7P51665 324 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 DYNC1I2Q13409 638 aaKnown RBP18.03■□□□□ 0.48
PNKP-203ENST00000593946 ZNF529Q6P280 563 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 MZT2AQ6P582 158 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 MRGPRGQ86SM5 289 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 DNAAF1Q8NEP3 725 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 SLC30A7Q8NEW0 376 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 MIXL1Q9H2W2 232 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 ABCB9Q9NP78 766 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 COMMD3Q9UBI1 195 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 A6NIN4 97 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 OR5H1A6NKK0 313 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 DHRS7CA6NNS2 312 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 XRCC2O43543 280 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 TMEM127O75204 238 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 PSMB1P20618 241 aaKnown RBP18.02■□□□□ 0.48
PNKP-203ENST00000593946 CFPP27918 469 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 ETV6P41212 452 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 CA7P43166 264 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 CASP6P55212 293 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 CCDC190Q86UF4 302 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 MYPOPQ86VE0 399 aaPredicted RBP18.02■□□□□ 0.48
PNKP-203ENST00000593946 OR51A2Q8NGJ7 313 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 OR5D14Q8NGL3 314 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 SPSB4Q96A44 273 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 PLEKHA1Q9HB21 404 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 MEMO1Q9Y316 297 aa18.02■□□□□ 0.48
PNKP-203ENST00000593946 TRGV8A0A0C4DH27 118 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 IGKV3-15P01624 115 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 CELA3BP08861 270 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 CD37P11049 281 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 CBR1P16152 277 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 TNFSF8P32971 234 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 GNALP38405 381 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 PPP3R1P63098 170 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 TMEM211Q6ICI0 200 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 PAQR4Q8N4S7 273 aaPredicted RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 APOBEC3DQ96AK3 386 aaPredicted RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 WDR12Q9GZL7 423 aaKnown RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 MEGF11A6BM72 1044 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 EEF1E1-BLOC1S5C9J1V9 151 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 EEF1E1O43324 174 aaKnown RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 IL32P24001 234 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 IDH3GP51553 393 aaPredicted RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 ZNF92Q03936 586 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 ZNF846Q147U1 533 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 TBC1D28Q2M2D7 210 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 RELL2Q8NC24 303 aaPredicted RBP18.01■□□□□ 0.47
PNKP-203ENST00000593946 AKAP1Q92667 903 aaKnown RBP eCLIP18.01■□□□□ 0.47
PNKP-203ENST00000593946 RND1Q92730 232 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 C10orf35Q96D05 121 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 JKAMPQ9P055 326 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 ABRACLQ9P1F3 81 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 AMDHD2Q9Y303 409 aa18.01■□□□□ 0.47
PNKP-203ENST00000593946 IGSF10Q6WRI0 2623 aa18■□□□□ 0.47
PNKP-203ENST00000593946 hCG_38984A0A1B0GV85 526 aa18■□□□□ 0.47
PNKP-203ENST00000593946 PAHP00439 452 aa18■□□□□ 0.47
PNKP-203ENST00000593946 WNT5AP41221 380 aa18■□□□□ 0.47
PNKP-203ENST00000593946 SPOCK1Q08629 439 aa18■□□□□ 0.47
PNKP-203ENST00000593946 TNK1Q13470 666 aa18■□□□□ 0.47
PNKP-203ENST00000593946 HES5Q5TA89 166 aa18■□□□□ 0.47
PNKP-203ENST00000593946 PGAP1Q75T13 922 aa18■□□□□ 0.47
PNKP-203ENST00000593946 LIX1LQ8IVB5 337 aa18■□□□□ 0.47
PNKP-203ENST00000593946 NKAIN3Q8N8D7 197 aa18■□□□□ 0.47
PNKP-203ENST00000593946 OR1M1Q8NGA1 313 aa18■□□□□ 0.47
PNKP-203ENST00000593946 CEP19Q96LK0 163 aa18■□□□□ 0.47
PNKP-203ENST00000593946 HEATR1Q9H583 2144 aaKnown RBP18■□□□□ 0.47
PNKP-203ENST00000593946 A0A0B4J203 849 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 HPGDSO60760 199 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 ACKR3P25106 362 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 THBS4P35443 961 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 TIMM23BQ5SRD1 257 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 ZNF101Q8IZC7 436 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 SEMA6DQ8NFY4 1073 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 OR13C9Q8NGT0 318 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 TRMT10AQ8TBZ6 339 aaKnown RBP17.99■□□□□ 0.47
PNKP-203ENST00000593946 PIGLQ9Y2B2 252 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 SLC25A15Q9Y619 301 aa17.99■□□□□ 0.47
PNKP-203ENST00000593946 ICMTO60725 284 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 AGFG2O95081 481 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 SNRPBP14678 240 aaKnown RBP17.98■□□□□ 0.47
PNKP-203ENST00000593946 FAHP16930 419 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 RAB3AP20336 220 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 FAM3AP98173 230 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 OR8B8Q15620 311 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 SPANXN2Q5MJ10 180 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 GLT8D1Q68CQ7 371 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 LYPD6Q86Y78 171 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 FAM169BQ8N8A8 192 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 PP6455Q8WZ26 134 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 TMEM138Q9NPI0 162 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 TBCCD1Q9NVR7 557 aa17.98■□□□□ 0.47
PNKP-203ENST00000593946 J3QW42 95 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms