RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 COMMD2Q86X83 199 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 LIX1LQ8IVB5 337 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 MCEMP1Q8IX19 187 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 IZUMO1Q8IYV9 350 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 LRRC18Q8N456 261 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 PNLDC1Q8NA58 520 aaKnown RBP9.13□□□□□ -0.95
VPS25-203ENST00000589520 KCNG3Q8TAE7 436 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 FBXO17Q96EF6 278 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
VPS25-203ENST00000589520 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 ZNF552Q9H707 407 aaPredicted RBP9.13□□□□□ -0.95
VPS25-203ENST00000589520 EXO5Q9H790 373 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 GLRX2Q9NS18 164 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 DLL3Q9NYJ7 618 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 ITGB1BP2Q9UKP3 347 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
VPS25-203ENST00000589520 ZNF175Q9Y473 711 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 OTOGLQ3ZCN5 2332 aa9.13□□□□□ -0.95
VPS25-203ENST00000589520 SPAARA0A1B0GVQ0 90 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 H3BSH0 61 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 SYNGR3O43761 229 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 LPLP06858 475 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 MELTFP08582 738 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 AKAIN1P0CW23 69 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 FCGR2AP12318 317 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 CRYGSP22914 178 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 RCVRNP35243 200 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 ALDH3B1P43353 468 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 SLC6A9P48067 706 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 MECP2P51608 486 aaKnown RBP9.12□□□□□ -0.95
VPS25-203ENST00000589520 TAS2R19P59542 299 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 RIPPLY1Q0D2K3 151 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 MAB21L1Q13394 359 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 CARTPTQ16568 116 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 RSPO4Q2I0M5 234 aaPredicted RBP9.12□□□□□ -0.95
VPS25-203ENST00000589520 CEACAM16Q2WEN9 425 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 ATAD3CQ5T2N8 411 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 ZBTB37Q5TC79 503 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 CD276Q5ZPR3 534 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 FGD2Q7Z6J4 655 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 TMEM229BQ8NBD8 167 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 OR52N4Q8NGI2 321 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 OR51A2Q8NGJ7 313 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 GPX8Q8TED1 209 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 ZNF845Q96IR2 970 aaPredicted RBP9.12□□□□□ -0.95
VPS25-203ENST00000589520 MED28Q9H204 178 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 LDAHQ9H6V9 325 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 AUNIPQ9H7T9 357 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 CNTD2Q9H8S5 307 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 MCUBQ9NWR8 336 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 PTTG3PQ9NZH4 202 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 UPB1Q9UBR1 384 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 CGGBP1Q9UFW8 167 aaPredicted RBP9.12□□□□□ -0.95
VPS25-203ENST00000589520 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
VPS25-203ENST00000589520 TRGV5A0A0B4J1U4 118 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ZNF891A8MT65 544 aaPredicted RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 FAM166BA8MTA8 275 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 TMEM14DPA8MWL7 114 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ZNF587BE7ETH6 402 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 DOK2O60496 412 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 PEX14O75381 377 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 TGM6O95932 706 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 F10P00742 488 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 IL5P05113 134 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 STOMP27105 288 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ERP29P30040 261 aaKnown RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 TNFSF10P50591 281 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 EFNB2P52799 333 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 RTP5Q14D33 572 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 RSPO1Q2MKA7 263 aaPredicted RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 PCGF3Q3KNV8 242 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 METTL11BQ5VVY1 283 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 AWAT2Q6E213 333 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 RTL6Q6ICC9 239 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 ANGPTL5Q86XS5 388 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ZNF100Q8IYN0 542 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 SEMA6DQ8NFY4 1073 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 OR4D6Q8NGJ1 314 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 OR13C9Q8NGT0 318 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 SPSB1Q96BD6 273 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 APH1AQ96BI3 265 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 POM121Q96HA1 1249 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 FAM71F1Q96KD3 344 aaPredicted RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 TECTBQ96PL2 329 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 URM1Q9BTM9 101 aaKnown RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 OR2H1Q9GZK4 316 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 CHST5Q9GZS9 411 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 CST11Q9H112 138 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 ZDHHC11Q9H8X9 412 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
VPS25-203ENST00000589520 NUDT15Q9NV35 164 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 KLK11Q9UBX7 282 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 PCNX2A6NKB5 2137 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 PCSK5Q92824 1860 aa9.11□□□□□ -0.95
VPS25-203ENST00000589520 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 TRAV17A0A0B4J275 112 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 A0A0B4J293 547 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms