RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 STMN2Q93045 179 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 SGK3Q96BR1 496 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 SIGLEC11Q96RL6 698 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 OR10A2Q9H208 303 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 RGCCQ9H4X1 137 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 NARFLQ9H6Q4 476 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 TREM2Q9NZC2 230 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 MRPL15Q9P015 296 aaKnown RBP12.21□□□□□ -0.45
MKS1-207ENST00000578789 ZNF319Q9P2F9 582 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
MKS1-207ENST00000578789 ZFHX3Q15911 3703 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.46
MKS1-207ENST00000578789 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
MKS1-207ENST00000578789 SONP18583 2426 aaKnown RBP12.2□□□□□ -0.46
MKS1-207ENST00000578789 LOC100289279A0A1B0GTE1 492 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 F5H5P2 479 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 IFNL4K9M1U5 179 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 ZNF254O75437 659 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 CRLF1O75462 422 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 IGHV2-70P01814 119 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 HLA-DPB1P04440 258 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 SBK2P0C263 348 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 CFL1P23528 166 aaKnown RBP12.2□□□□□ -0.46
MKS1-207ENST00000578789 DDOSTP39656 456 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 MVKQ03426 396 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 POU4F2Q12837 409 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 ZSCAN26Q16670 478 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 TIGD6Q17RP2 521 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 ZNF181Q2M3W8 571 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 ZNF679Q8IYX0 411 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 RFLNBQ8N5W9 214 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 TRUB1Q8WWH5 349 aaKnown RBP12.2□□□□□ -0.46
MKS1-207ENST00000578789 REEP6Q96HR9 211 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 PGAM5Q96HS1 289 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 MBOAT4Q96T53 435 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 SLC29A1Q99808 456 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 MROQ9BYG7 248 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 CLN6Q9NWW5 311 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 KCNS2Q9ULS6 477 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 N6AMT1Q9Y5N5 214 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 NPTNQ9Y639 398 aa12.2□□□□□ -0.46
MKS1-207ENST00000578789 ACOD1A6NK06 481 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 FAM157AC9JC47 383 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 GMDSO60547 372 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 LMX1BO60663 402 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 HNRNPA0Q13151 305 aaKnown RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 MAB21L1Q13394 359 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 OR8G1Q15617 311 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 OR8B8Q15620 311 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 ZIK1Q3SY52 487 aaPredicted RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 SLC25A30Q5SVS4 291 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 ZBTB49Q6ZSB9 765 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 PEG10Q86TG7 708 aaKnown RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 KLBQ86Z14 1044 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 OR8B12Q8NGG6 310 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 OR51G2Q8NGK0 314 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 Q8TCH9 128 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 EME1Q96AY2 570 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 ADAT1Q9BUB4 502 aaKnown RBP12.19□□□□□ -0.46
MKS1-207ENST00000578789 BRD7Q9NPI1 651 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 IMPAD1Q9NX62 359 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
MKS1-207ENST00000578789 B4DSR2 109 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 ZNF670-ZNF695F2Z2N8 137 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 BAG2O95816 211 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 TGFAP01135 160 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 IGHV2-5P01817 119 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 CA6P23280 308 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
MKS1-207ENST00000578789 CXCR4P61073 352 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
MKS1-207ENST00000578789 EGR3Q06889 387 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 ZNF829Q3KNS6 432 aaPredicted RBP12.18□□□□□ -0.46
MKS1-207ENST00000578789 KRTAP21-3Q3LHN1 58 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 TMEM155Q4W5P6 130 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 ZNF322Q6U7Q0 402 aaPredicted RBP12.18□□□□□ -0.46
MKS1-207ENST00000578789 RFKQ969G6 155 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 ERGIC1Q969X5 290 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 RAB39BQ96DA2 213 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 ZNF665Q9H7R5 613 aa12.18□□□□□ -0.46
MKS1-207ENST00000578789 A0A0U1RQV5 110 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 TMEM269A0A1B0GVZ9 245 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 ANKRD30BLA7E2S9 258 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 PSMD9O00233 223 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 SRSF10O75494 262 aaKnown RBP12.17□□□□□ -0.46
MKS1-207ENST00000578789 FSTL3O95633 263 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 OR2T7P0C7T2 308 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 GABRB1P18505 474 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 GSK3AP49840 483 aa12.17□□□□□ -0.46
MKS1-207ENST00000578789 RIDAP52758 137 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms