RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ARGFXA6NJG6 315 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 SFTPBP07988 381 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 SLC35G6P0C7Q6 338 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 THEGLP0DJG4 465 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 CEBPGP53567 150 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 TAS2R60P59551 318 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 ANKRD55Q3KP44 614 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 ATG101Q9BSB4 218 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 NUDT9Q9BW91 350 aa14.52□□□□□ -0.08
LINC00554-201ENST00000564841 METTL8Q9H825 291 aaKnown RBP14.52□□□□□ -0.08
LINC00554-201ENST00000564841 RTTNQ86VV8 2226 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.09
LINC00554-201ENST00000564841 RAMP1O60894 148 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 TSPAN15O95858 294 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 SOD3P08294 240 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 DDTP30046 118 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 RPS23P62266 143 aaKnown RBP14.52□□□□□ -0.09
LINC00554-201ENST00000564841 GUK1Q16774 197 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 FHL5Q5TD97 284 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 POMZP3Q6PJE2 187 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 APCDD1LQ8NCL9 501 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 FOXQ1Q9C009 403 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 LMAN1LQ9HAT1 526 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 HRASLS2Q9NWW9 162 aa14.52□□□□□ -0.09
LINC00554-201ENST00000564841 EIF1AYO14602 144 aaKnown RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 EIF1AXP47813 144 aaKnown RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 ARRB1P49407 418 aaPredicted RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SPEM2Q0P670 501 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 CDCP2Q5VXM1 449 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 BEND4Q6ZU67 534 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 OR56B1Q8NGI3 324 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 TMEM230Q96A57 120 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SLC25A44Q96H78 314 aaPredicted RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 KLHDC3Q9BQ90 382 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 C8orf33Q9H7E9 229 aaPredicted RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 KIR3DX1Q9H7L2 352 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 FAM86C1Q9NVL1 165 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 NUP210LQ5VU65 1888 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 IFNA6P05013 189 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 HIST1H1BP16401 226 aaKnown RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SLC6A9P48067 706 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SULT1A2P50226 295 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SSBP1Q04837 148 aaKnown RBP14.51□□□□□ -0.09
LINC00554-201ENST00000564841 PRSS54Q6PEW0 395 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 CLEC18BQ6UXF7 455 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 HIST2H3AQ71DI3 136 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 RNF144BQ7Z419 303 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 EXD3Q8N9H8 876 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 LURAP1Q96LR2 239 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 NMES1Q9C002 83 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 OPA3Q9H6K4 179 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 DHDHQ9UQ10 334 aa14.51□□□□□ -0.09
LINC00554-201ENST00000564841 SHISA7A6NL88 538 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ZNF726A6NNF4 738 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ARPC3O15145 178 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 B3GALT2O43825 422 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 OR2C1O95371 312 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 IFNA17P01571 189 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 CSTBP04080 98 aaKnown RBP14.5□□□□□ -0.09
LINC00554-201ENST00000564841 IGHV4-34P06331 123 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 USF2Q15853 346 aaPredicted RBP14.5□□□□□ -0.09
LINC00554-201ENST00000564841 DMRTC1Q5HYR2 192 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 LCN10Q6JVE6 187 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ULK3Q6PHR2 472 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 LINC00114Q6XXX2 140 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 REC114Q7Z4M0 266 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ASB5Q8WWX0 329 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ZNF524Q96C55 264 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 RAB11FIP5Q9BXF6 653 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 DAPP1Q9UN19 280 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 LOC101059948A0A1B0GTJ6 334 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 C17orf51A8MQB3 221 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 RAB27BO00194 218 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 MESTQ5EB52 335 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 OR52R1Q8NGF1 315 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SLC37A2Q8TED4 501 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SLC39A7Q92504 469 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SCRT1Q9BWW7 348 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 C5orf66Q9H5L9 145 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 RCL1Q9Y2P8 373 aaKnown RBP14.5□□□□□ -0.09
LINC00554-201ENST00000564841 RFNGQ9Y644 331 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 H0YGG7 62 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 TMEM127O75204 238 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 CXCL1P09341 107 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 G0S2P27469 103 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 CCR4P51679 360 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ARF3P61204 181 aaPredicted RBP14.5□□□□□ -0.09
LINC00554-201ENST00000564841 ZNF674Q2M3X9 581 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 RCBTB1Q8NDN9 531 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 TSTD1Q8NFU3 115 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SOX7Q9BT81 388 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 TRIM2Q9C040 744 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 WASF3Q9UPY6 502 aa14.5□□□□□ -0.09
LINC00554-201ENST00000564841 SCAND1P57086 179 aa14.49□□□□□ -0.09
LINC00554-201ENST00000564841 CHAF1BQ13112 559 aa14.49□□□□□ -0.09
LINC00554-201ENST00000564841 ZNF260Q3ZCT1 412 aa14.49□□□□□ -0.09
LINC00554-201ENST00000564841 KHDC3LQ587J8 217 aa14.49□□□□□ -0.09
LINC00554-201ENST00000564841 FIGLAQ6QHK4 219 aa14.49□□□□□ -0.09
LINC00554-201ENST00000564841 HEPN1Q6WQI6 88 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms