RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZC3HAV1LQ96H79 300 aaKnown RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FAM71F1Q96KD3 344 aaPredicted RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FOXB1Q99853 325 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 LDAHQ9H6V9 325 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SPRR3Q9UBC9 169 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 MCTS1Q9ULC4 181 aaKnown RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SPENQ96T58 3664 aaKnown RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM272A0A1B0GTI8 110 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FAM240BA0A1B0GVZ2 78 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 TRIM77I1YAP6 450 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 ACOT7O00154 380 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SHOXO15266 292 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 CTAG2O75638 210 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FCER2P06734 321 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 CST2P09228 141 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SSTR2P30874 369 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 OTX1P32242 354 aaPredicted RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF774Q6NX45 483 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SIAH3Q8IW03 269 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SLC22A24Q8N4F4 322 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 TOMM5Q8N4H5 51 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 DUSP18Q8NEJ0 188 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 OR52N4Q8NGI2 321 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FGFBP3Q8TAT2 258 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 LYZL4Q96KX0 146 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 EXO5Q9H790 373 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 ZDHHC11Q9H8X9 412 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 CALHM2Q9HA72 323 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 RHBDD3Q9Y3P4 386 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 LAMA5O15230 3695 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 FRYQ5TBA9 3013 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 TRGV5A0A0B4J1U4 118 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 LOC390937A0A1W2PQ73 354 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 MEGF11A6BM72 1044 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 TEX46H3BTG2 121 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SGCEO43556 437 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ORC5O43913 435 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ACTL6AO96019 429 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ARSBP15848 533 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 CCL1P22362 96 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 BDKRB2P30411 391 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 BTCP35070 178 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 TAS2R20P59543 309 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF529Q6P280 563 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM65Q6PI78 240 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 IGFL2Q6UWQ7 119 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR1M1Q8NGA1 313 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR4D6Q8NGJ1 314 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR5D14Q8NGL3 314 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR6M1Q8NGM8 313 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR13C9Q8NGT0 318 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 OR52I2Q8NH67 350 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ST8SIA2Q92186 375 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 UPRTQ96BW1 309 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 PGAM5Q96HS1 289 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 PRRG4Q9BZD6 226 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SLCO5A1Q9H2Y9 848 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SLC7A10Q9NS82 523 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 MYEF2Q9P2K5 600 aaKnown RBP8.24□□□□□ -1.09
LINC00838-201ENST00000562956 CACNG2Q9Y698 323 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 GVINP1Q7Z2Y8 2422 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 M0R135 149 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 EFSO43281 561 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SYNGR3O43761 229 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 KRT33AO76009 404 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 KDM4BO94953 1096 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF20P17024 532 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF32P17041 273 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SLC6A1P30531 599 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 BTN1A1Q13410 526 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 C1orf100Q5SVJ3 147 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SFRP5Q5T4F7 317 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 HACD4Q5VWC8 232 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ANKRD16Q6P6B7 361 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SKA3Q8IX90 412 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 NKAIN3Q8N8D7 197 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF799Q96GE5 643 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 WDYHV1Q96HA8 205 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 CNTD2Q9H8S5 307 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM138Q9NPI0 162 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 SLC17A5Q9NRA2 495 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ING3Q9NXR8 418 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 EMC3Q9P0I2 261 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 KLK11Q9UBX7 282 aa8.24□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF891A8MT65 544 aaPredicted RBP8.23□□□□□ -1.09
LINC00838-201ENST00000562956 FABP7O15540 132 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 XRCC3O43542 346 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 WISP2O76076 250 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 IGLV3-1P01715 115 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 CRYGSP22914 178 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 GDNFP39905 211 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 HGFACQ04756 655 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 RAB35Q15286 201 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF767PQ75MW2 155 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 DOK3Q7L591 496 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 RNF144BQ7Z419 303 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 COMMD7Q86VX2 200 aa8.23□□□□□ -1.09
LINC00838-201ENST00000562956 AKR7LQ8NHP1 331 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms