RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 GID4Q8IVV7 300 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 C10orf67Q8IYJ2 551 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 LINC01356Q8N9X3 169 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 RAB1CQ92928 201 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 REEP6Q96HR9 211 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 PGAM5Q96HS1 289 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 LPAR2Q9HBW0 351 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 GCM1Q9NP62 436 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 KCNS2Q9ULS6 477 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 NPTNQ9Y639 398 aa12.97□□□□□ -0.33
CCNDBP1-203ENST00000562553 WNK2Q9Y3S1 2297 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 hCG_38984A0A1B0GV85 526 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 ISPDA4D126 451 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 E9PQ18 207 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 IGHV2-70P01814 119 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 APOC1P02654 83 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 PMELP40967 661 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 FAM3AP98173 230 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 MAB21L1Q13394 359 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 PRAMEF6Q5VXH4 476 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 MOGAT3Q86VF5 341 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 SLC35F2Q8IXU6 374 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 OR8B12Q8NGG6 310 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 FAM81AQ8TBF8 368 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 UBE2FQ969M7 185 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 MBOAT4Q96T53 435 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 SLC29A1Q99808 456 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 ADAT1Q9BUB4 502 aaKnown RBP12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 OR10A2Q9H208 303 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 OPA3Q9H6K4 179 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 ZNF665Q9H7R5 613 aa12.96□□□□□ -0.33
CCNDBP1-203ENST00000562553 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 MAGEB4O15481 346 aaPredicted RBP12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 APOL3O95236 402 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 CYB5R3P00387 301 aaPredicted RBP12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 IGHV2-5P01817 119 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 CD200P41217 278 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 RAD23AP54725 363 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 OR8G1Q15617 311 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 OR52H1Q8NGJ2 320 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 OR51G2Q8NGK0 314 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 OR8J1Q8NGP2 316 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 EME1Q96AY2 570 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 HRASLS5Q96KN8 279 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 C9orf16Q9BUW7 83 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 SP140LQ9H930 580 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 TMEM160Q9NX00 188 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 HAO2Q9NYQ3 351 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 MRPL15Q9P015 296 aaKnown RBP12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 ORC6Q9Y5N6 252 aa12.95□□□□□ -0.34
CCNDBP1-203ENST00000562553 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 B4DSR2 109 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ZNF205O95201 554 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 BAG2O95816 211 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 SBK2P0C263 348 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 HTR1FP30939 366 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 GSK3AP49840 483 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 CDC42P60953 191 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 CXCR4P61073 352 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ROM1Q03395 351 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 KCTD18Q6PI47 426 aaPredicted RBP12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 PEG10Q86TG7 708 aaKnown RBP12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ZNF679Q8IYX0 411 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 ASB17Q8WXJ9 295 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 LYZL4Q96KX0 146 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 TBX5Q99593 518 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 MROQ9BYG7 248 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 PPP1R3EQ9H7J1 279 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 NIPAL2Q9H841 368 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 WARS2Q9UGM6 360 aaKnown RBP12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
CCNDBP1-203ENST00000562553 MSMBP08118 114 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 ACKR3P25106 362 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 GATA4P43694 442 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 DVL1P1P54792 670 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 BTG1P62324 171 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 MPPED2Q15777 294 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 CR1LQ2VPA4 569 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 CHRFAM7AQ494W8 412 aa12.93□□□□□ -0.34
CCNDBP1-203ENST00000562553 FAM120AOSQ5T036 256 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms