RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NMNAT3Q96T66 252 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 SYT4Q9H2B2 425 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 PRDM13Q9H4Q3 707 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 DNAJB11Q9UBS4 358 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 SEC16AO15027 2179 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1W2PR64 198 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 IFNA2P01563 188 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 SFTPCP11686 197 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 MYF5P13349 255 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 GLB1P16278 677 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 NME2P22392 152 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 GRK6P43250 576 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 LPAR6P43657 344 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 CHAF1BQ13112 559 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF74Q16587 644 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PRSS54Q6PEW0 395 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PRR22Q8IZ63 422 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 ZSCAN4Q8NAM6 433 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 MCHR2Q969V1 340 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 GAL3ST4Q96RP7 486 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 ADOQ96SZ5 270 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 FAM86C1Q9NVL1 165 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 C5orf51A6NDU8 294 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 EEF1E1-BLOC1S5C9J1V9 151 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 TSTD3H0UI37 97 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 LY86O95711 162 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PLGP00747 810 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 SNRNP70P08621 437 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PET100P0DJ07 73 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 GIMD1P0DJR0 217 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 DCAF7P61962 342 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 ADAM8P78325 824 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 RASGEF1BQ0VAM2 473 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 C2orf76Q3KRA6 126 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 NCMAPQ5T1S8 102 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 PAPD4Q6PIY7 484 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 LRRC75AQ8NAA5 344 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 Q96M85 177 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 MOGAT1Q96PD6 335 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 KLHDC3Q9BQ90 382 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 CST11Q9H112 138 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 FRRS1LQ9P0K9 344 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 KCNG2Q9UJ96 466 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 HIF3AQ9Y2N7 669 aa12.45□□□□□ -0.42
RABGGTA-220ENST00000560998 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ADAMTS20P59510 1910 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1B0GVT2 93 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 SMAD9O15198 467 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ABHD16AO95870 558 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 F10P00742 488 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ADH6P28332 368 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 DDTP30046 118 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 EGR4Q05215 589 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ZP2Q05996 745 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 EBPQ15125 230 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ADAM5Q6NVV9 412 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ETV3LQ6ZN32 361 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF584Q8IVC4 421 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 C9orf40Q8IXQ3 194 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 C10orf53Q8N6V4 93 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 OR6K6Q8NGW6 343 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 HLA-CQ95604 372 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 S100PBPQ96BU1 408 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC6A7Q99884 636 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 RTN4RQ9BZR6 473 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 NRSN2Q9GZP1 204 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 BCO1Q9HAY6 547 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 MMP25Q9NPA2 562 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 TMED3Q9Y3Q3 217 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 FER1L5A0AVI2 2057 aa12.44□□□□□ -0.42
RABGGTA-220ENST00000560998 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ALOX12BO75342 701 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 SERPINF1P36955 418 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 KIAA0141Q14154 515 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 NSDHLQ15738 373 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 RNASE10Q5GAN6 216 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 C1orf189Q5VU69 101 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 TCEAL6Q6IPX3 200 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 KMT5CQ86Y97 462 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 PRSS58Q8IYP2 241 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 RRNAD1Q96FB5 475 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms