RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 WDR76Q9H967 626 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ADGRL4Q9HBW9 690 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CCNB1IP1Q9NPC3 277 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 INPP5EQ9NRR6 644 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 MRPL22Q9NWU5 206 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF224Q9NZL3 707 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CNOT2Q9NZN8 540 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 DNAJC27Q9NZQ0 273 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CRNNQ9UBG3 495 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 BLOC1S6Q9UL45 172 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 EXOGQ9Y2C4 368 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SLC25A15Q9Y619 301 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 LHFPL6Q9Y693 200 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ESPL1Q14674 2120 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZGRF1Q86YA3 2104 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 MED12LQ86YW9 2145 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR6C6A6NF89 314 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF593O00488 134 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 MRPS14O60783 128 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF254O75437 659 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 MPZL1O95297 269 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RAB36O95755 333 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 IGKV3-15P01624 115 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 IGLV1-44P01699 117 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 HLA-HP01893 362 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 APOC1P02654 83 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 SERPINA5P05154 406 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF14P17017 642 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ALOX5APP20292 161 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DCKP27707 260 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DCTDP32321 178 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 CAPZA2P47755 286 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ACTA2P62736 377 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ACTG2P63267 376 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 SSBP2P81877 361 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RAB35Q15286 201 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 CEP78Q5JTW2 689 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RBM48Q5RL73 367 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 C9orf135Q5VTT2 229 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RNLSQ5VYX0 342 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 LAIR2Q6ISS4 152 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 KCTD18Q6PI47 426 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 UGT2A3Q6UWM9 527 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 C1QL2Q7Z5L3 287 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 BCDIN3DQ7Z5W3 292 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 KCTD20Q7Z5Y7 419 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 CDC20BQ86Y33 519 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ERI1Q8IV48 349 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 C1orf174Q8IYL3 243 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 SPARTQ8N0X7 666 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ACBD7Q8N6N7 88 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 PNLDC1Q8NA58 520 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 OR1J2Q8NGS2 313 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 OTOSQ8NHW6 89 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 CNIH3Q8TBE1 160 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 HAVCR2Q8TDQ0 301 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ST7LQ8TDW4 575 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RNF133Q8WVZ7 376 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 MYDGFQ969H8 173 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 LGALS12Q96DT0 336 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DAZAP1Q96EP5 407 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RADILQ96JH8 1075 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 CNBD2Q96M20 576 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 WFIKKN1Q96NZ8 548 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 SH3GL3Q99963 347 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 MED18Q9BUE0 208 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DUSP21Q9H596 190 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 NIPAL2Q9H841 368 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 FGF20Q9NP95 211 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DDX28Q9NUL7 540 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 FKBP14Q9NWM8 211 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 SCN3BQ9NY72 215 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 KCNN3Q9UGI6 736 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 PSORS1C1Q9UIG5 152 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 DIMT1Q9UNQ2 313 aaKnown RBP4.96□□□□□ -1.62
SCAF11-213ENST00000550629 POLR1DQ9Y2S0 133 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 TPRKBQ9Y3C4 175 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 RELNP78509 3460 aa4.96□□□□□ -1.62
SCAF11-213ENST00000550629 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ANKHD1Q8IWZ3 2542 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 USP9YO00507 2555 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 COL12A1Q99715 3063 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 IQCMA0A1B0GVH7 501 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TVP23AA6NH52 213 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ACOD1A6NK06 481 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF878C9JN71 531 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF670-ZNF695F2Z2N8 137 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SLC1A7O00341 560 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CASKO14936 926 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SGCEO43556 437 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SELENOFO60613 162 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SULT1C4O75897 302 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SEC14L2O76054 403 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 LYNP07948 512 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 RPSAP08865 295 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SPARCP09486 303 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TACSTD2P09758 323 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CD79AP11912 226 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms