RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ALOX12BO75342 701 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZMPSTE24O75844 475 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 SLC25A14O95258 325 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 DNAH10OSP0CZ25 163 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 THRAP10827 490 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 PRKACBP22694 351 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 HTR2CP28335 458 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 HCCSP53701 268 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF266Q14584 549 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 TCEAL5Q5H9L2 206 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 C6orf183Q5T699 404 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 CD300LGQ6UXG3 332 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 NCCRP1Q6ZVX7 275 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 LINC00469Q8N7U9 141 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 C19orf18Q8NEA5 215 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR6N2Q8NGY6 317 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 LILRB4Q8NHJ6 448 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 C15orf40Q8WUR7 153 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 TCEAL3Q969E4 200 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 TM4SF18Q96CE8 201 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 BMFQ96LC9 184 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 CAMK2N2Q96S95 79 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 OSBPL11Q9BXB4 747 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 CHRNA10Q9GZZ6 450 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 CFAP45Q9UL16 551 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 NEU3Q9UQ49 428 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 KLF12Q9Y4X4 402 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 ANKRD20A5PA0PJZ0 165 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 SOCS1O15524 211 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 RRP8O43159 456 aaKnown RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 GCM2O75603 506 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 YIF1AO95070 293 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TTC4O95801 387 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 PSMC3P17980 439 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TCP1P17987 556 aaKnown RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 GNRHRP30968 328 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 CD70P32970 193 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 GFERP55789 205 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 ST3GAL4Q11206 333 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF658BQ4V348 819 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TSPO2Q5TGU0 170 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR2T5Q6IEZ7 315 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TMEM205Q6UW68 189 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 COPS6Q7L5N1 327 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR2T29Q8NH02 315 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 LGALS14Q8TCE9 139 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TMEM234Q8WY98 164 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 SMARCD1Q96GM5 515 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TIMM17AQ99595 171 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TSNAXQ99598 290 aaKnown RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 SLC25A39Q9BZJ4 359 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 TMEM27Q9HBJ8 222 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 ANKHQ9HCJ1 492 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 SIGLEC9Q9Y336 463 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 V9GYY9 64 aa3.51□□□□□ -1.85
HMGB1P47-201ENST00000511281 IGHV2OR16-5A0A0B4J2B6 119 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 HSBP1L1C9JCN9 74 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 LCN1P31025 176 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 ARL2P36404 184 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 NDUFA8P51970 172 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 ZNF133P52736 654 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 CDKN2DP55273 166 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 ESRRGP62508 458 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 PAFAH1B2P68402 229 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR1Q1Q15612 314 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 UBE2SQ16763 222 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 NKAIN4Q8IVV8 208 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 CDKL3Q8IVW4 592 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 UBAC2Q8NBM4 344 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 PTX4Q96A99 478 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 HINT2Q9BX68 163 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 HMG20AQ9NP66 347 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 DDX19AQ9NUU7 478 aaKnown RBP3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 CELA1Q9UNI1 258 aa3.5□□□□□ -1.85
HMGB1P47-201ENST00000511281 IGHV1OR15-9A0A0B4J2B8 117 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 LINC00854A0A1B0GVQ3 168 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 C11orf94C9JXX5 98 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 TNFRSF11BO00300 401 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 BPY2O14599 106 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 UPK1BO75841 260 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 NPPAP01160 153 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 PTHP01270 115 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 RHOCP08134 193 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 DTYMKP23919 212 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 MLF1P58340 268 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 RPL31P62899 125 aaKnown RBP3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 LOXL1Q08397 574 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 C2orf54Q08AI8 447 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 STEAP4Q687X5 459 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 DUPD1Q68J44 220 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 RTL4Q6ZR62 310 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 DRAXINQ8NBI3 349 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 OR51A7Q8NH64 312 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 CYYR1Q96J86 154 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 RDH12Q96NR8 316 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 ULBP2Q9BZM5 246 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 ACOT9Q9Y305 439 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 HYOU1Q9Y4L1 999 aa3.49□□□□□ -1.85
HMGB1P47-201ENST00000511281 H7C2Y5 167 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms