RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	PGAM5	Q96HS1	289 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SIGLEC11	Q96RL6	698 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IL4I1	Q96RQ9	567 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PKP2	Q99959	881 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RIBC2	Q9H4K1	309 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SP140L	Q9H930	580 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	UFSP2	Q9NUQ7	469 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ENOPH1	Q9UHY7	261 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PSMD9	O00233	223 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PCMT1	P22061	227 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	POLR2I	P36954	125 aa	Known RBP	11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SRP14	P37108	136 aa	Known RBP	11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MAB21L1	Q13394	359 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZMYND11	Q15326	602 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PRAMEF6	Q5VXH4	476 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	C12orf73	Q69YU5	71 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RHOU	Q7L0Q8	258 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MEPCE	Q7L2J0	689 aa	Known RBP	11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PRSS45	Q7RTY3	260 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	KRT77	Q7Z794	578 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	KLHL36	Q8N4N3	616 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TMEM163	Q8TC26	289 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAHD2A	Q96GK7	314 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ADAT1	Q9BUB4	502 aa	Known RBP	11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OSBPL10	Q9BXB5	764 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TTTY10	Q9BZA0	68 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SLC22A4	Q9H015	551 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OR10A2	Q9H208	303 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZNF319	Q9P2F9	582 aa		11.91	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CUBN	O60494	3623 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TRAV20	A0A0B4J274	112 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459		A0A1B0GWJ7	208 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LRRC30	A6NM36	301 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459		H3BNX3	289 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IFNL4	K9M1U5	179 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IRF2	P14316	349 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ALOX5AP	P20292	161 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PMEL	P40967	661 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LCN2	P80188	198 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAM3A	P98173	230 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAM201A	Q5SY85	155 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LRRC28	Q86X40	367 aa	Predicted RBP	11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SPIC	Q8N5J4	248 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OR52H1	Q8NGJ2	320 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SPSB4	Q96A44	273 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RBM4B	Q9BQ04	359 aa	Known RBP	11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	YIPF3	Q9GZM5	350 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OPA3	Q9H6K4	179 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MRPL15	Q9P015	296 aa	Known RBP	11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	NOP16	Q9Y3C1	178 aa	Known RBP	11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LRP12	Q9Y561	859 aa		11.9	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ARHGAP32	A7KAX9	2087 aa		11.9	□□□□□ -0.51
CCHCR1-222	ENST00000507459	ANKRD30BL	A7E2S9	258 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	GMDS	O60547	372 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	DDOST	P39656	456 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	MDH2	P40926	338 aa	Known RBP	11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	CD200	P41217	278 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	EFNB1	P98172	346 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	MPPED2	Q15777	294 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	TMEM155	Q4W5P6	130 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	AADACL4	Q5VUY2	407 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	NXNL2	Q5VZ03	156 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	ZFP1	Q6P2D0	407 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	KCTD18	Q6PI47	426 aa	Predicted RBP	11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	C1orf87	Q8N0U7	546 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	OR11L1	Q8NGX0	322 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	CNN2	Q99439	309 aa	Known RBP	11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	MDFI	Q99750	246 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	PATZ1	Q9HBE1	687 aa	Known RBP	11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	COPS3	Q9UNS2	423 aa		11.89	□□□□□ -0.51
CCHCR1-222	ENST00000507459	WNK2	Q9Y3S1	2297 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	PPIAL4E	A0A075B759	164 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	hCG_38984	A0A1B0GV85	526 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	SLC22A31	A6NKX4	558 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	PPIAL4D	F5H284	164 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	FAM20B	O75063	409 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	GRP	P07492	148 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	PPIAL4F	P0DN26	164 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	CFL1	P23528	166 aa	Known RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	GATA4	P43694	442 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	GSK3A	P49840	483 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	PSMA6	P60900	246 aa	Known RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	SEC61A1	P61619	476 aa	Known RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	ZNF181	Q2M3W8	571 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	C10orf67	Q8IYJ2	551 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	MUC20	Q8N307	709 aa	Predicted RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	CELF2-AS1	Q8N7Q2	184 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	BOLL	Q8N9W6	283 aa	Known RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	C19orf18	Q8NEA5	215 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	DEFB108B	Q8NET1	73 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	OR8S1	Q8NH09	359 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	ERGIC1	Q969X5	290 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	GABARAPL3	Q9BY60	117 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	MRO	Q9BYG7	248 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	NIPAL2	Q9H841	368 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	FN3KRP	Q9HA64	309 aa		11.88	□□□□□ -0.51
CCHCR1-222	ENST00000507459	TMEM165	Q9HC07	324 aa		11.88	□□□□□ -0.51

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