RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ITLN2Q8WWU7 325 aaPredicted RBP12.56□□□□□ -0.4
LRIF1-202ENST00000485275 REEP6Q96HR9 211 aa12.56□□□□□ -0.4
LRIF1-202ENST00000485275 GFI1Q99684 422 aa12.56□□□□□ -0.4
LRIF1-202ENST00000485275 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
LRIF1-202ENST00000485275 DHDHQ9UQ10 334 aa12.56□□□□□ -0.4
LRIF1-202ENST00000485275 CDRT1O95170 752 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 OR10A3P58181 314 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 TMEM255AQ5JRV8 349 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 CA5BP1Q8WTZ4 195 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 SPSB4Q96A44 273 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 ZC3HAV1LQ96H79 300 aaKnown RBP12.55□□□□□ -0.4
LRIF1-202ENST00000485275 OR10A2Q9H208 303 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 ZNF275Q9NSD4 429 aaPredicted RBP12.55□□□□□ -0.4
LRIF1-202ENST00000485275 CRIM1Q9NZV1 1036 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 STARD10Q9Y365 291 aa12.55□□□□□ -0.4
LRIF1-202ENST00000485275 FLNCQ14315 2725 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 CADP27708 2225 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 IGHV2OR16-5A0A0B4J2B6 119 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 A0A0G2JK05 382 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 A0A1B0GVI7 797 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 ADRA2CP18825 462 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 GK2Q14410 553 aaPredicted RBP12.54□□□□□ -0.4
LRIF1-202ENST00000485275 HLXQ14774 488 aaPredicted RBP12.54□□□□□ -0.4
LRIF1-202ENST00000485275 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 CEP78Q5JTW2 689 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 OR51A2Q8NGJ7 313 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 APOBEC3DQ96AK3 386 aaPredicted RBP12.54□□□□□ -0.4
LRIF1-202ENST00000485275 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 TAS2R4Q9NYW5 299 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 GSTK1Q9Y2Q3 226 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 V9GYS6 101 aa12.54□□□□□ -0.4
LRIF1-202ENST00000485275 M0R1B8 84 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 DHRS3O75911 302 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 RNF224P0DH78 156 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 MTNR1BP49286 362 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 FAM3AP98173 230 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 NAAAQ02083 359 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 DMRTC1Q5HYR2 192 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 SPATA46Q5T0L3 261 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 DOK3Q7L591 496 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 LRRTM1Q86UE6 522 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 FGGYQ96C11 551 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 MUCL1Q96DR8 90 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 TPK1Q9H3S4 243 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 SNTG1Q9NSN8 517 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 FAHP16930 419 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
LRIF1-202ENST00000485275 OR8B8Q15620 311 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 MED18Q9BUE0 208 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 OR10A4Q9H209 315 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 CDH20Q9HBT6 801 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
LRIF1-202ENST00000485275 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 CASKO14936 926 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 XRCC2O43543 280 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 ARL6IP5O75915 188 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 IL1AP01583 271 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 SRMP19623 302 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 FSTP19883 344 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 MAPK3P27361 379 aaPredicted RBP12.52□□□□□ -0.41
LRIF1-202ENST00000485275 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 WFDC8Q8IUA0 241 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 PHYHIPQ92561 330 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 SLC25A46Q96AG3 418 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
LRIF1-202ENST00000485275 FAM208BQ5VWN6 2430 aa12.52□□□□□ -0.41
LRIF1-202ENST00000485275 LOC390937A0A1W2PQ73 354 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 LILRA1O75019 489 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 RAF1P04049 648 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 GSK3AP49840 483 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 UCP2P55851 309 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 C3orf36Q3SXR2 165 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 ZNF529Q6P280 563 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 OR2J1Q9GZK6 312 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 KCNJ16Q9NPI9 418 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 AK6Q9Y3D8 172 aaKnown RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 COL12A1Q99715 3063 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms