RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SELENOFO60613 162 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 FAM20BO75063 409 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 ENTPD6O75354 484 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 RP2O75695 350 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 DHRS3O75911 302 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 ATP6V1G2O95670 118 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 MT-ND2P03891 347 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 LCATP04180 440 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 PSKH1P11801 424 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 VHLP40337 213 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 MAP2K3P46734 347 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 CX3CR1P49238 355 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 SRP9P49458 86 aaKnown RBP4.33□□□□□ -1.72
HDAC6-223ENST00000480525 PDLIM4P50479 330 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF81P51508 661 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TAS2R43P59537 309 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 FAM3AP98173 230 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 IL5RAQ01344 420 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 GPR50Q13585 617 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TAF13Q15543 124 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 NKPD1Q17RQ9 610 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 MSMPQ1L6U9 139 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM155Q4W5P6 130 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 Q5PR19 223 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM244Q5VVB8 128 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM154Q6P9G4 183 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 CORO6Q6QEF8 472 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 CLEC2AQ6UVW9 174 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 DOK3Q7L591 496 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 BIVMQ86UB2 503 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 CATSPERDQ86XM0 798 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 GALNT4Q8N4A0 578 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 TEX29Q8N6K0 151 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 BBS1Q8NFJ9 593 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 OR51L1Q8NGJ5 315 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 UBASH3BQ8TF42 649 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 PP6455Q8WZ26 134 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 FAM168AQ92567 244 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 NEUROG1Q92886 237 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 C12orf43Q96C57 262 aaKnown RBP4.33□□□□□ -1.72
HDAC6-223ENST00000480525 SORCS2Q96PQ0 1159 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 SIGLEC11Q96RL6 698 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 PIMREGQ9BSJ6 248 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 CDCA4Q9BXL8 241 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 LIME1Q9H400 295 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 RERGLQ9H628 205 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 MED20Q9H944 212 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 DYNLRB1Q9NP97 96 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 G6PC2Q9NQR9 355 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 C14orf119Q9NWQ9 140 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 BLOC1S6Q9UL45 172 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 EXOSC1Q9Y3B2 195 aaKnown RBP4.33□□□□□ -1.72
HDAC6-223ENST00000480525 GRIP1Q9Y3R0 1128 aa4.33□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF816-ZNF321PA0A0X1KG74 233 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 A0A1W2PPW3 197 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 A0A1W2PQL4 384 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TRIM64A6NGJ6 449 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 GPR37O15354 613 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NDUFA2O43678 99 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TIMM8AO60220 97 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NOS1APO75052 506 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 GPANK1O95872 356 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 IGHV1-46P01743 117 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TTRP02766 147 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 HEXAP06865 529 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 DBHP09172 617 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 FAM157BP0CG42 384 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CCL2P13500 99 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 DAOP14920 347 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 PCMT1P22061 227 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 GALP22466 123 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CCNOP22674 350 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 GATA3P23771 443 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 MPZP25189 248 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 THBS2P35442 1172 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ATP6V1E1P36543 226 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NAA10P41227 235 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NR4A2P43354 598 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 RANBP1P43487 201 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SLC6A9P48067 706 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CDH15P55291 814 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF121P58317 390 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 GABARAPL2P60520 117 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SLC35A2P78381 396 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF85Q03923 595 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF92Q03936 586 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 KCNJ8Q15842 424 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TIGD6Q17RP2 521 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CLEC12BQ2HXU8 276 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SNAI3Q3KNW1 292 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 LIPNQ5VXI9 398 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 LYPD4Q6UWN0 246 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 LRRN1Q6UXK5 716 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TMPRSS11AQ6ZMR5 421 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 UTS2BQ765I0 119 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 MRPL21Q7Z2W9 205 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms