RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 CFAP77Q6ZQR2 320 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 ZNF826PQ6ZT77 177 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 OR51G2Q8NGK0 314 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 ITPKCQ96DU7 683 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 DNAJB11Q9UBS4 358 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 PRPF19Q9UMS4 504 aaKnown RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 M0R135 149 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 IMPA2O14732 288 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 MPIG6BO95866 241 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 LHBP01229 141 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 KDELR2P33947 212 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 SELENOWP63302 87 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 PRB3Q04118 309 aaPredicted RBP13.15□□□□□ -0.3
DDX56-210ENST00000479440 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
DDX56-210ENST00000479440 SLC36A3Q495N2 470 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 FOXB2Q5VYV0 432 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 C11orf87Q6NUJ2 197 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 PTCHD4Q6ZW05 846 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 NDUFA11Q86Y39 141 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 LINC00346Q8IVM7 164 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 LYG1Q8N1E2 194 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 FAM216BQ8N7L0 139 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 Q8N7P7 452 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 SLC7A13Q8TCU3 470 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 CCL13Q99616 98 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 SSX3Q99909 188 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 DCTN5Q9BTE1 182 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 MMP28Q9H239 520 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 OPA3Q9H6K4 179 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 RNPEPL1Q9HAU8 725 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 DNAH3Q8TD57 4116 aa13.15□□□□□ -0.3
DDX56-210ENST00000479440 A0A1B0GW55 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 FAM220BPB1ANY3 271 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 J3KTA2 159 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 BHLHE40O14503 412 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L2P0CJ85 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L3P0CJ86 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L4P0CJ87 422 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L5P0CJ88 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L6P0CJ89 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L7P0CJ90 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 ZNF92Q03936 586 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 POU4F2Q12837 409 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 IKZF1Q13422 519 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 LY6EQ16553 131 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4L9Q6RFH8 374 aaPredicted RBP13.14□□□□□ -0.31
DDX56-210ENST00000479440 PNKDQ8N490 385 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 H1FXQ92522 213 aaKnown RBP13.14□□□□□ -0.31
DDX56-210ENST00000479440 C12orf43Q96C57 262 aaKnown RBP13.14□□□□□ -0.31
DDX56-210ENST00000479440 ANKRD19PQ9H560 264 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 METTL8Q9H825 291 aaKnown RBP13.14□□□□□ -0.31
DDX56-210ENST00000479440 DUX4Q9UBX2 424 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 SIGLEC7Q9Y286 467 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 IER3IP1Q9Y5U9 82 aa13.14□□□□□ -0.31
DDX56-210ENST00000479440 IGLV1-36A0A0B4J1U3 117 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 M0R1W7 72 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 TXNDC12O95881 172 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 DLX1P56177 255 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 BLMHQ13867 455 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 RFX4Q33E94 735 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 DPY19L2P2Q6ZN68 376 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
DDX56-210ENST00000479440 NAA40Q86UY6 237 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 OR8S1Q8NH09 359 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 TNFRSF14Q92956 283 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 FAM46AQ96IP4 442 aaKnown RBP13.13□□□□□ -0.31
DDX56-210ENST00000479440 WWC2-AS2Q96NR7 200 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 TSSK2Q96PF2 358 aa13.13□□□□□ -0.31
DDX56-210ENST00000479440 KRCC1Q9NPI7 259 aaPredicted RBP13.13□□□□□ -0.31
DDX56-210ENST00000479440 PNRC2Q9NPJ4 139 aaKnown RBP13.13□□□□□ -0.31
DDX56-210ENST00000479440 DCTN6O00399 190 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 FFAR1O14842 300 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 RENP00797 406 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 CD33P20138 364 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
DDX56-210ENST00000479440 AANATQ16613 207 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 TBPL2Q6SJ96 375 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 LNX2Q8N448 690 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms