RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ELF3P78545 371 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PRKCDQ05655 676 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 ST3GAL3Q11203 375 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 KLRD1Q13241 179 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DCTN2Q13561 401 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NFYCQ13952 458 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 OR8G1Q15617 311 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 KCNMB1Q16558 191 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 MEP1BQ16820 701 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 FOXB2Q5VYV0 432 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 TEX36Q5VZQ5 186 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 C11orf88Q6PI97 169 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CORO6Q6QEF8 472 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L9Q6RFH8 374 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CFAP77Q6ZQR2 320 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PTCHD4Q6ZW05 846 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PGAP1Q75T13 922 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 ADCK1Q86TW2 530 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CALHM3Q86XJ0 350 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 OFCC1Q8IZS5 231 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 LYG1Q8N1E2 194 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PNKDQ8N490 385 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 GCSAMQ8N6F7 178 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 Q8N7P7 452 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DTX3Q8N9I9 347 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 BOLLQ8N9W6 283 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SPERTQ8NA61 448 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 GJC3Q8NFK1 279 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 OR4S1Q8NGB4 309 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 OR4C13Q8NGP0 309 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SPRYD4Q8WW59 207 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 TNFRSF14Q92956 283 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PRRC1Q96M27 445 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF583Q96ND8 569 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 RERGLQ9H628 205 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NMNAT1Q9HAN9 279 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 LIN7BQ9HAP6 207 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SIRT7Q9NRC8 400 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NKIRAS1Q9NYS0 192 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 VSX1Q9NZR4 365 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 KAAG1Q9UBP8 84 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4Q9UBX2 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 RPS6KA6Q9UK32 745 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 POLR1DQ9Y2S0 133 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NDUFAF1Q9Y375 327 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NOP16Q9Y3C1 178 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 IGHV3OR15-7A0A075B7D8 119 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A087WUU8 490 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 IGLV1-36A0A0B4J1U3 117 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 LOC100653049A0A140TA62 436 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A1W2PRD5 423 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A1W2PRF3 423 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A1W2PRM7 423 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 hCG_1807616A0A1W2PRN6 198 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 A6NLC8 198 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 F5H5K5 113 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 H3BUX3 64 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 J3KTA2 159 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 K7EIL1 84 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 FXYD1O00168 92 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 DCTN6O00399 190 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 FFAR1O14842 300 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 GSC2O15499 205 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 GMDSO60547 372 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 FBXO24O75426 580 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 KRT34O76011 436 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PPP1R3DO95685 299 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MPIG6BO95866 241 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 LCATP04180 440 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 FSTP19883 344 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ANOS1P23352 680 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 EEF1B2P24534 225 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MDH1P40925 334 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 UBE2E1P51965 193 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ACSM1Q08AH1 577 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 TRAP1Q12931 704 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MALLQ13021 153 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PCK2Q16822 640 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 NSUN5P1Q3KNT7 163 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SNAI3Q3KNW1 292 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ZBED5Q49AG3 693 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 LRRC23Q53EV4 343 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 CYBRD1Q53TN4 286 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 RABL3Q5HYI8 236 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 WDR38Q5JTN6 314 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 GPR139Q6DWJ6 353 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 NANOGP8Q6NSW7 305 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC18B1Q6NT16 456 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 PGM2L1Q6PCE3 622 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 CRIP3Q6Q6R5 217 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF826PQ6ZT77 177 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 TMPRSS11FQ6ZWK6 438 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MBOAT2Q6ZWT7 520 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 MRPL21Q7Z2W9 205 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 CROCCP2Q86T23 111 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 NAA40Q86UY6 237 aa4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 RNF113BQ8IZP6 322 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-204ENST00000474025 CMTM4Q8IZR5 234 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms