RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 GABARAPO95166 117 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 ATE1O95260 518 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 SOX2P48431 317 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 PRSS12P56730 875 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 PPP1CBP62140 327 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 FAM3AP98173 230 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 TNK1Q13470 666 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 GK2Q14410 553 aaPredicted RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 HLXQ14774 488 aaPredicted RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 CTF1Q16619 201 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 DOK3Q7L591 496 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 CEACAM19Q7Z692 300 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 COMMD2Q86X83 199 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 OR5L1Q8NGL2 311 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 OR1J1Q8NGS3 322 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 SSC4DQ8WTU2 575 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 REPIN1Q9BWE0 567 aaKnown RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 RGCCQ9H4X1 137 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 RNF167Q9H6Y7 350 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 EXOSC4Q9NPD3 245 aaKnown RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 BATF3Q9NR55 127 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 TXNL4BQ9NX01 149 aaKnown RBP13.13□□□□□ -0.31
CRAT-208ENST00000464290 CRIM1Q9NZV1 1036 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 SSR3Q9UNL2 185 aa13.13□□□□□ -0.31
CRAT-208ENST00000464290 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 J3QW42 95 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 ABCD4O14678 606 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 SERPINA3P01011 423 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 OCM2P0CE71 109 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 GALP22466 123 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 RAD52P43351 418 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 TMBIM6P55061 237 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 MALLQ13021 153 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 Q499Y3 187 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 ZMAT1Q5H9K5 638 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 DMRTC2Q8IXT2 367 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 SLC25A40Q8TBP6 338 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
CRAT-208ENST00000464290 DERL3Q96Q80 235 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 OR2J1Q9GZK6 312 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 ESRP2Q9H6T0 727 aaKnown RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 ZNF275Q9NSD4 429 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 ZNF391Q9UJN7 358 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 KLF2Q9Y5W3 355 aaPredicted RBP13.12□□□□□ -0.31
CRAT-208ENST00000464290 V9GYS6 101 aa13.12□□□□□ -0.31
CRAT-208ENST00000464290 TRBV5-7A0A0A0MS05 114 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 A6NIN4 97 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 DEFB108AA8MXU0 73 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 CASKO14936 926 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 GATBO75879 557 aaKnown RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 DHRS3O75911 302 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ACKR3P25106 362 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 TGFBR1P36897 503 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 PEX19P40855 299 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 GSK3AP49840 483 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 NCS1P62166 190 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 SNTB2Q13425 540 aaKnown RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 TIMM50Q3ZCQ8 353 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 BEX5Q5H9J7 111 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 C22orf42Q6IC83 251 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 OR13C3Q8NGS6 347 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 TSEN15Q8WW01 171 aaKnown RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 FGGYQ96C11 551 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ORAI1Q96D31 301 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 MARS2Q96GW9 593 aaKnown RBP13.11□□□□□ -0.31
CRAT-208ENST00000464290 RADILQ96JH8 1075 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
CRAT-208ENST00000464290 ICE1Q9Y2F5 2266 aa13.1□□□□□ -0.31
CRAT-208ENST00000464290 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
CRAT-208ENST00000464290 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
CRAT-208ENST00000464290 CCDC160A6NGH7 325 aa13.1□□□□□ -0.31
CRAT-208ENST00000464290 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
CRAT-208ENST00000464290 UCHL1P09936 223 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms