RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ADAT3Q96EY9 351 aaPredicted RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 PLSCR3Q9NRY6 295 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 PAQR5Q9NXK6 330 aaPredicted RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 TRAV18A0A075B6X5 111 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 GJE1A6NN92 205 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 RER1O15258 196 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 SYT7O43581 403 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 DNPH1O43598 174 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 PEX14O75381 377 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 WISP2O76076 250 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 HSD11B1P28845 292 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 RCVRNP35243 200 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 RFC3P40938 356 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 MEOX1P50221 254 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 SUCLG1P53597 346 aaKnown RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 LSM6P62312 80 aaKnown RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 FAPQ12884 760 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 IGFBP7Q16270 282 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ZNF813Q6ZN06 617 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ADGRE4PQ86SQ3 457 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ATG5Q9H1Y0 275 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 EMC3Q9P0I2 261 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 KLF13Q9Y2Y9 288 aaPredicted RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 NPIPA2E9PIF3 369 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 NPIPA3F8WFD2 350 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 SMAD9O15198 467 aaKnown RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 RBBP9O75884 186 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 ANOS1P23352 680 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 BDKRB2P30411 391 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 ZNF121P58317 390 aaPredicted RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 TNK1Q13470 666 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 RNFT1Q5M7Z0 435 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FAAP20Q6NZ36 180 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 GGNQ86UU5 652 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR1M1Q8NGA1 313 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR8B12Q8NGG6 310 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR4D6Q8NGJ1 314 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR6N1Q8NGY5 312 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR51E1Q8TCB6 317 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 ZFAND1Q8TCF1 268 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 PTX4Q96A99 478 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 NABP1Q96AH0 204 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FOXRED1Q96CU9 486 aaPredicted RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 ZNF416Q9BWM5 594 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 ITGB1BP2Q9UKP3 347 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FLVCR2Q9UPI3 526 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 HIVEP3Q5T1R4 2406 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 A0A1B0GVI7 797 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 KLRC4-KLRK1H3BQV0 150 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 RFPL3SP0C7P2 107 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 MSR1P21757 451 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 CCL1P22362 96 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 ENPP1P22413 925 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 CTSSP25774 331 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 CX3CR1P49238 355 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 PRKXP51817 358 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 GRB2P62993 217 aaKnown RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 ENDOGQ14249 297 aaKnown RBP9.41□□□□□ -0.9
PKP4-206ENST00000452162 TAF13Q15543 124 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 Q5BKY6 102 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FAM180AQ6UWF9 173 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 FGD2Q7Z6J4 655 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 SORCS2Q96PQ0 1159 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 NKIRAS2Q9NYR9 191 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 ZNF319Q9P2F9 582 aa9.41□□□□□ -0.9
PKP4-206ENST00000452162 PRAF2O60831 178 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 CSF1P09603 554 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 GSTT2P0CG29 244 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SULT1A3P0DMM9 295 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SULT1A4P0DMN0 295 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SLC2A1P11166 492 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 CNR1P21554 472 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 PRSS3P35030 304 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 VEGFCP49767 419 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SELENOPP49908 381 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 RAC3P60763 192 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.9
PKP4-206ENST00000452162 SGCAQ16586 387 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 PCGF3Q3KNV8 242 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 ZNF324BQ6AW86 544 aaPredicted RBP9.4□□□□□ -0.9
PKP4-206ENST00000452162 LUZP2Q86TE4 346 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 OR52N4Q8NGI2 321 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 OR14L1PQ8NHC6 308 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 GPX8Q8TED1 209 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 PHF21AQ96BD5 680 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 TMEM246Q9BRR3 403 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 SF3B5Q9BWJ5 86 aaKnown RBP9.4□□□□□ -0.9
PKP4-206ENST00000452162 OR10A4Q9H209 315 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms