RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CD96P40200 585 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 TGFBR3Q03167 851 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 PDZK1IP1Q13113 114 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 TMEM71Q6P5X7 295 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 OR1L3Q8NH93 324 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 RHBDD1Q8TEB9 315 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 PHYHIPLQ96FC7 376 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 YBX2Q9Y2T7 364 aaKnown RBP14.92□□□□□ -0.02
TCOF1-206ENST00000445265 TRAV8-7A0A075B6U6 113 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 A0A087WZY1 265 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 A0A1W2PQF6 199 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 GABRA1P14867 456 aa14.92□□□□□ -0.02
TCOF1-206ENST00000445265 RPS4Y1P22090 263 aaKnown RBP14.92□□□□□ -0.02
TCOF1-206ENST00000445265 HSD17B13Q7Z5P4 300 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-206ENST00000445265 CPNE4Q96A23 557 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-206ENST00000445265 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-206ENST00000445265 PIAS2O75928 621 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 SLC37A1P57057 533 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 MYBPHQ13203 477 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 PPP1R1AQ13522 171 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 PLPP5Q8NEB5 264 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 OR9K2Q8NGE7 335 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 OR10Z1Q8NGY1 313 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 PUS1Q9Y606 427 aaKnown RBP eCLIP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 ZNF814B7Z6K7 855 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 DHHO43323 396 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 ABHD16AO95870 558 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 DUSP1P28562 367 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 FCGR2CP31995 323 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 NKX6-1P78426 367 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 LANCL3Q6ZV70 420 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 OR5M8Q8NGP6 311 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 FLVCR1Q9Y5Y0 555 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 MGAMO43451 1857 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 NANOS3P60323 173 aaKnown RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 FAM109BQ6ICB4 259 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 OR51A4Q8NGJ6 313 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 SPACA9Q96E40 222 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 ZNF107Q9UII5 783 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 SIT1Q9Y3P8 196 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 OR5H8P0DN80 308 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 THBS4P35443 961 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 TLE4Q04727 773 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 DCAF12Q5T6F0 453 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 C9orf135Q5VTT2 229 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 SLC22A25Q6T423 547 aa14.91□□□□□ -0.02
TCOF1-206ENST00000445265 INTS12Q96CB8 462 aaKnown RBP14.91□□□□□ -0.02
TCOF1-206ENST00000445265 RPS10-NUDT3A0A1W2PQS6 291 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 RAB19A4D1S5 217 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SEMA7AO75326 666 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 EPPINO95925 133 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 IGKV1D-16P01601 117 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 RPS10P46783 165 aaKnown RBP14.9□□□□□ -0.02
TCOF1-206ENST00000445265 CLINT1Q14677 625 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 C1QL3Q5VWW1 255 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 DTX4Q9Y2E6 619 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 FBXO7Q9Y3I1 522 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 IGHV1OR21-1A0A087WYE8 117 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SMCO3A2RU48 225 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 KLF4O43474 513 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 B3GALNT1O75752 331 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 GUSBP08236 651 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SMIM10L1P0DMW3 83 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 ALDH3B1P43353 468 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 UBE2KP61086 200 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 DPPA2Q7Z7J5 298 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SLC30A7Q8NEW0 376 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SMIM10Q96HG1 83 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 ABOP16442 354 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 CD80P33681 288 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 LYPD8Q6UX82 237 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 BPHLQ86WA6 291 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-206ENST00000445265 CLRN3Q8NCR9 226 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 CADM4Q8NFZ8 388 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 OR10AC1Q8NH08 325 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 KIR2DS1A0A191URI9 304 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 FOXS1O43638 330 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 FPR2P25090 351 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 KIR2DS4P43632 304 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 KIR2DS1Q14954 304 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 USF2Q15853 346 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-206ENST00000445265 SFRP5Q5T4F7 317 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 FAHD2BQ6P2I3 314 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-206ENST00000445265 RFLNBQ8N5W9 214 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 FAHD2AQ96GK7 314 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 TIMM10BQ9Y5J6 103 aa14.9□□□□□ -0.02
TCOF1-206ENST00000445265 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 CCDC163A0A0D9SF12 145 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 C9orf170A2RU37 121 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 TMEM229AB2RXF0 380 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 E5RGE8 158 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 DUS4LO95620 317 aaKnown RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 HIST1H1DP16402 221 aaKnown RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 SGK3Q96BR1 496 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 GPX7Q96SL4 187 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 KCNE5Q9UJ90 142 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 NSG2Q9Y328 171 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF250P15622 560 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 SRSF5Q13243 272 aaKnown RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 MSMO1Q15800 293 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms