RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PPP1R3AQ16821 1122 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 HYAL4Q2M3T9 481 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 HKDC1Q2TB90 917 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM91A1Q658Y4 838 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PLEKHG7Q6ZR37 379 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF767PQ75MW2 155 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 FGFRL1Q8N441 504 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 MREGQ8N565 214 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CAMKVQ8NCB2 501 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 C19orf18Q8NEA5 215 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR4C15Q8NGM1 316 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 AENQ8WTP8 325 aaKnown RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PGM2Q96G03 612 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 BSCL2Q96G97 398 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PANX3Q96QZ0 392 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR2A5Q96R48 311 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PFDN5Q99471 154 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 NAPGQ99747 312 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 DERL2Q9GZP9 239 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR51M1Q9H341 326 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 GAL3ST2Q9H3Q3 398 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ARMC7Q9H6L4 198 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 RANBP3Q9H6Z4 567 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 EXO5Q9H790 373 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 IL1RL2Q9HB29 575 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 LRTM1Q9HBL6 345 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ANKHQ9HCJ1 492 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 BIN3Q9NQY0 253 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CHRAC1Q9NRG0 131 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ABCB10Q9NRK6 738 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CENPMQ9NSP4 180 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 NLE1Q9NVX2 485 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SDHAF2Q9NX18 166 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 KLHL28Q9NXS3 571 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF226Q9NYT6 803 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CD274Q9NZQ7 290 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 MLXQ9UH92 298 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF221Q9UK13 617 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 COPS3Q9UNS2 423 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 YARS2Q9Y2Z4 477 aaKnown RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 DHRS7Q9Y394 339 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 YLPM1P49750 1951 aaKnown RBP3.65□□□□□ -1.82
HMGB3P5-201ENST00000428894 KCNE1BA0A087WTH5 132 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 A0A1B0GV90 55 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 MFSD2BA6NFX1 497 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SAGE2PA6NJ88 616 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 WASHC1A8K0Z3 465 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 FAM166BA8MTA8 275 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ITGB1BP1O14713 200 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CD5LO43866 347 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 EIF1BO60739 113 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SAP30O75446 220 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 GPX5O75715 221 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SULT1C4O75897 302 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 GLSO94925 669 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 C1orf105O95561 183 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 P04436 131 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 IFNA6P05013 189 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERPING1P05155 500 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 FBP1P09467 338 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 H2AFZP0C0S5 128 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC2A1P11166 492 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 NR2C1P13056 603 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 IFI30P13284 250 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 OGNP20774 298 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PTAFRP25105 342 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCR7P32248 378 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 RPA3P35244 121 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ADRA1AP35348 466 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 EIF1P41567 113 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 MAGEA2P43356 314 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PRPS1P60891 318 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 RPS15AP62244 130 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ESRRGP62508 458 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 DYNLT1P63172 113 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 MYBPC1Q00872 1141 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 GALK2Q01415 458 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ACSM1Q08AH1 577 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 STX4Q12846 297 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 IL18Q14116 193 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SELPLGQ14242 412 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 TOMM34Q15785 309 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 DDI2Q5TDH0 399 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 GPR107Q5VW38 600 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 HACD4Q5VWC8 232 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 RPL13AP3Q6NVV1 102 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCDC137Q6PK04 289 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 REG3GQ6UW15 175 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CENPUQ71F23 418 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 H2AFVQ71UI9 128 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CYP4Z1Q86W10 505 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ANKRD46Q86W74 232 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC26A11Q86WA9 606 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 DHFR2Q86XF0 187 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF567Q8N184 647 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 KIF2BQ8N4N8 673 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms