RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 LYZL4Q96KX0 146 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 SLC29A1Q99808 456 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 RBM4BQ9BQ04 359 aaKnown RBP9.04□□□□□ -0.96
ATG4B-210ENST00000428861 TEX12Q9BXU0 123 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 ADGRL4Q9HBW9 690 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 USE1Q9NZ43 259 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 PPP1R3CQ9UQK1 317 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 LRP12Q9Y561 859 aa9.04□□□□□ -0.96
ATG4B-210ENST00000428861 DNHD1Q96M86 4753 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 ISPDA4D126 451 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 APOL3O95236 402 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 SBK2P0C263 348 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 CD200P41217 278 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 DVL1P1P54792 670 aaPredicted RBP9.03□□□□□ -0.96
ATG4B-210ENST00000428861 SEC61A1P61619 476 aaKnown RBP9.03□□□□□ -0.96
ATG4B-210ENST00000428861 GFOD2Q3B7J2 385 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 ZIK1Q3SY52 487 aaPredicted RBP9.03□□□□□ -0.96
ATG4B-210ENST00000428861 CHRFAM7AQ494W8 412 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 ZFP1Q6P2D0 407 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 RHOUQ7L0Q8 258 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 SSX6Q7RTT6 188 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 CBR4Q8N4T8 237 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 OR8B12Q8NGG6 310 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 RAB1CQ92928 201 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 TIMD4Q96H15 378 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 MBOAT4Q96T53 435 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 CNN2Q99439 309 aaKnown RBP9.03□□□□□ -0.96
ATG4B-210ENST00000428861 YIPF3Q9GZM5 350 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 HIF1ANQ9NWT6 349 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 UBAP1Q9NZ09 502 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 AASSQ9UDR5 926 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 LAMP5Q9UJQ1 280 aa9.03□□□□□ -0.96
ATG4B-210ENST00000428861 FBN1P35555 2871 aaKnown RBP9.03□□□□□ -0.96
ATG4B-210ENST00000428861 B4DSR2 109 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 XRCC2O43543 280 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PLPP2O43688 288 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PTBP3O95758 552 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PNPP00491 289 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 AVPP01185 164 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 MSMBP08118 114 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 ACKR3P25106 362 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 ZFP36P26651 326 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 GATA4P43694 442 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 SRP9P49458 86 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 GSK3AP49840 483 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 ALDH3A2P51648 485 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 BTG1P62324 171 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 MFGE8Q08431 387 aaPredicted RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 OR8G1Q15617 311 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 TIGD6Q17RP2 521 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 LCN1P1Q5VSP4 162 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PLEKHG7Q6ZR37 379 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 LRRC28Q86X40 367 aaPredicted RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 C19orf18Q8NEA5 215 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 EME1Q96AY2 570 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 TMEM186Q96B77 213 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 PGAM5Q96HS1 289 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 OR8B4Q96RC9 309 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 GAL3ST1Q99999 423 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 ADAT1Q9BUB4 502 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 BEX2Q9BXY8 128 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 FGF23Q9GZV9 251 aaPredicted RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 SHARPINQ9H0F6 387 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 OR10A2Q9H208 303 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 TMEM165Q9HC07 324 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 G6PC2Q9NQR9 355 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 UFSP2Q9NUQ7 469 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 FAM206AQ9NX38 181 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 MRPL15Q9P015 296 aaKnown RBP9.02□□□□□ -0.97
ATG4B-210ENST00000428861 CDC42EP3Q9UKI2 254 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 RHBDD3Q9Y3P4 386 aa9.02□□□□□ -0.97
ATG4B-210ENST00000428861 SLC22A31A6NKX4 558 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 F5H0A9 414 aaPredicted RBP9.01□□□□□ -0.97
ATG4B-210ENST00000428861 C3orf80F5H4A9 247 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 FAM20BO75063 409 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
ATG4B-210ENST00000428861 HTR1FP30939 366 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 CXCR4P61073 352 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 ROM1Q03395 351 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 OR8B8Q15620 311 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
ATG4B-210ENST00000428861 ZNF826PQ6ZT77 177 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.01□□□□□ -0.97
ATG4B-210ENST00000428861 C11orf53Q8IXP5 236 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 PQLC1Q8N2U9 271 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 OR52H1Q8NGJ2 320 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 OR51G2Q8NGK0 314 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 OR51F2Q8NH61 342 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 Q8TCH9 128 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 TBX5Q99593 518 aa9.01□□□□□ -0.97
ATG4B-210ENST00000428861 MDFIQ99750 246 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms