RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PLPP2O43688 288 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 ALOX5APP20292 161 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 KPNB1Q14974 876 aaKnown RBP17.09■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF181Q2M3W8 571 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 LCN1P1Q5VSP4 162 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 FAM57BQ71RH2 274 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
GTF3A-202ENST00000419181 SLC16A9Q7RTY1 509 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 MOGAT3Q86VF5 341 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 LRRC28Q86X40 367 aaPredicted RBP17.09■□□□□ 0.33
GTF3A-202ENST00000419181 SPICQ8N5J4 248 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 OR56B2PQ8NGI1 322 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 YIPF3Q9GZM5 350 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 G6PC2Q9NQR9 355 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF319Q9P2F9 582 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 NOP16Q9Y3C1 178 aaKnown RBP17.09■□□□□ 0.33
GTF3A-202ENST00000419181 H3BNX3 289 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 EBAG9O00559 213 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 GMDSO60547 372 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 THBS2P35442 1172 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 MDH2P40926 338 aaKnown RBP17.08■□□□□ 0.32
GTF3A-202ENST00000419181 PMELP40967 661 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 RAD23AP54725 363 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 FAM3AP98173 230 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 OR8G1Q15617 311 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.08■□□□□ 0.32
GTF3A-202ENST00000419181 TCEANCQ8N8B7 351 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 TMEM163Q8TC26 289 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 SGK3Q96BR1 496 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 REEP6Q96HR9 211 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 ADAT1Q9BUB4 502 aaKnown RBP17.08■□□□□ 0.32
GTF3A-202ENST00000419181 LAMP5Q9UJQ1 280 aa17.08■□□□□ 0.32
GTF3A-202ENST00000419181 hCG_38984A0A1B0GV85 526 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 SAC3D1A6NKF1 404 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 PTBP3O95758 552 aaKnown RBP17.07■□□□□ 0.32
GTF3A-202ENST00000419181 CYB5R3P00387 301 aaPredicted RBP17.07■□□□□ 0.32
GTF3A-202ENST00000419181 DDOSTP39656 456 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 HCCSP53701 268 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 TIGD6Q17RP2 521 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 AADACL4Q5VUY2 407 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 NXNL2Q5VZ03 156 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 LRRN1Q6UXK5 716 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 BCDIN3DQ7Z5W3 292 aaKnown RBP17.07■□□□□ 0.32
GTF3A-202ENST00000419181 MUC20Q8N307 709 aaPredicted RBP17.07■□□□□ 0.32
GTF3A-202ENST00000419181 KLHL36Q8N4N3 616 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 Q8TCH9 128 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 ERGIC1Q969X5 290 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 OSBPL10Q9BXB5 764 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 GABARAPL3Q9BY60 117 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 OR10A2Q9H208 303 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 NIPAL2Q9H841 368 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 PATZ1Q9HBE1 687 aaKnown RBP17.07■□□□□ 0.32
GTF3A-202ENST00000419181 BRD7Q9NPI1 651 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 ARHGAP32A7KAX9 2087 aa17.07■□□□□ 0.32
GTF3A-202ENST00000419181 LRRC30A6NM36 301 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 FSTL3O95633 263 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PNPP00491 289 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 MRPL3P09001 348 aaKnown RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 CFL1P23528 166 aaKnown RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 POLR2IP36954 125 aaKnown RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PSMA6P60900 246 aaKnown RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PRAMEF6Q5VXH4 476 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 ZFP1Q6P2D0 407 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 MEPCEQ7L2J0 689 aaKnown RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 KLBQ86Z14 1044 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 DVL3Q92997 716 aaPredicted RBP17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PGAM5Q96HS1 289 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PKP2Q99959 881 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 RGCCQ9H4X1 137 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 PCDHB10Q9UN67 800 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 LRP12Q9Y561 859 aa17.06■□□□□ 0.32
GTF3A-202ENST00000419181 A0A0G2JMP0 313 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 A0A0X1KG70 313 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 RNF212BA8MTL3 300 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 F5H0A9 414 aaPredicted RBP17.05■□□□□ 0.32
GTF3A-202ENST00000419181 MPPED2Q15777 294 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 GFOD2Q3B7J2 385 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 FAHD2BQ6P2I3 314 aaPredicted RBP17.05■□□□□ 0.32
GTF3A-202ENST00000419181 KCTD18Q6PI47 426 aaPredicted RBP17.05■□□□□ 0.32
GTF3A-202ENST00000419181 DEGS2Q6QHC5 323 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 KRT77Q7Z794 578 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 C1orf87Q8N0U7 546 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 SPERTQ8NA61 448 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 PLPP7Q8NBV4 271 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 OR4M2Q8NGB6 313 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 FAHD2AQ96GK7 314 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 IL4I1Q96RQ9 567 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 CNN2Q99439 309 aaKnown RBP17.05■□□□□ 0.32
GTF3A-202ENST00000419181 RBM4BQ9BQ04 359 aaKnown RBP17.05■□□□□ 0.32
GTF3A-202ENST00000419181 TMEM165Q9HC07 324 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 UFSP2Q9NUQ7 469 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 COPS3Q9UNS2 423 aa17.05■□□□□ 0.32
GTF3A-202ENST00000419181 SLC22A31A6NKX4 558 aa17.04■□□□□ 0.32
GTF3A-202ENST00000419181 CEACAM18A8MTB9 384 aa17.04■□□□□ 0.32
GTF3A-202ENST00000419181 PRR32B1ATL7 298 aa17.04■□□□□ 0.32
GTF3A-202ENST00000419181 FAM20BO75063 409 aa17.04■□□□□ 0.32
GTF3A-202ENST00000419181 ZNF205O95201 554 aa17.04■□□□□ 0.32
GTF3A-202ENST00000419181 ZFP36P26651 326 aaKnown RBP17.04■□□□□ 0.32
GTF3A-202ENST00000419181 SRP14P37108 136 aaKnown RBP17.04■□□□□ 0.32
GTF3A-202ENST00000419181 GSK3AP49840 483 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms