RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TVP23AA6NH52 213 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 TMEM210A6NLX4 147 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 ANXA2P2A6NMY6 339 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 A8MXK9 166 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 CDC14BO60729 498 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SULT1C4O75897 302 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 NCR1O76036 304 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 ECDO95905 644 aaPredicted RBP5.4□□□□□ -1.54
USP54-202ENST00000413442 CST4P01036 141 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 IGHV2-70P01814 119 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 IGHV2-5P01817 119 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 DBHP09172 617 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 WNT2P09544 360 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SBK2P0C263 348 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 MUC1P15941 1255 aaPredicted RBP5.4□□□□□ -1.54
USP54-202ENST00000413442 SRD5A1P18405 259 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SLC2A5P22732 501 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 IGFBP5P24593 272 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 GNALP38405 381 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OPRL1P41146 370 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 PRKXP51817 358 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 RPS7P62081 194 aaKnown RBP5.4□□□□□ -1.54
USP54-202ENST00000413442 BTG1P62324 171 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR8G1Q15617 311 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 TIGD6Q17RP2 521 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 ZNF829Q3KNS6 432 aaPredicted RBP5.4□□□□□ -1.54
USP54-202ENST00000413442 KLHL12Q53G59 568 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 FAM76BQ5HYJ3 339 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 FAM120AOSQ5T036 256 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 AADACL4Q5VUY2 407 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 C12orf73Q69YU5 71 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR2T2Q6IF00 324 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 PLBD1Q6P4A8 553 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 Q6ZR03 302 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 PLEKHG7Q6ZR37 379 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 DCDC5Q6ZRR9 648 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 USP43Q70EL4 1123 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 NAA40Q86UY6 237 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 LINC00346Q8IVM7 164 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 GALNT4Q8N4A0 578 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR4M2Q8NGB6 313 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR51L1Q8NGJ5 315 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR10S1Q8NGN2 331 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR10Z1Q8NGY1 313 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SPATA3Q8NHX4 192 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 NANPQ8TBE9 248 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SLC7A6Q92536 515 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OTULINQ96BN8 352 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 SGK3Q96BR1 496 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 C12orf43Q96C57 262 aaKnown RBP5.4□□□□□ -1.54
USP54-202ENST00000413442 C10orf35Q96D05 121 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 HRASLS5Q96KN8 279 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 Q96MT0 163 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 TECTBQ96PL2 329 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 HIST1H2AAQ96QV6 131 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 OR2V2Q96R30 315 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 GAL3ST1Q99999 423 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 C9orf16Q9BUW7 83 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 GABARAPL3Q9BY60 117 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 DNTTIP1Q9H147 329 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 CLN6Q9NWW5 311 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 PPIAL4AQ9Y536 164 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.4□□□□□ -1.551e-6■■■■□ 25.3
USP54-202ENST00000413442 TMEM269A0A1B0GVZ9 245 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 LRP5LA4QPB2 252 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 FAM183AA6NL82 134 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ZNF670-ZNF695F2Z2N8 137 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 LYNX1G3V0Z9 82 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 GPANK1O95872 356 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 PNPP00491 289 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 GYPBP06028 91 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ACAA1P09110 424 aaPredicted RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 LYNX1P0DP58 116 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ADRA2CP18825 462 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 FPR2P25090 351 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 HTR1FP30939 366 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 CX3CR1P49238 355 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ALDH3A2P51648 485 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 RIDAP52758 137 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 PSMA6P60900 246 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 SNRPGP62308 76 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 FAM3AP98173 230 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 MVKQ03426 396 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ZNF92Q03936 586 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 MRPL28Q13084 256 aaKnown RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 APOFQ13790 326 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 CCNIQ14094 377 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 HLXQ14774 488 aaPredicted RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 OR8B8Q15620 311 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 OCLNQ16625 522 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 CR1LQ2VPA4 569 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ALKBH6Q3KRA9 238 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 ESCO2Q56NI9 601 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 DCAF12L2Q5VW00 463 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 LRRN1Q6UXK5 716 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 Q6ZSR3 168 aa5.39□□□□□ -1.55
USP54-202ENST00000413442 Q71RC1 249 aaPredicted RBP5.39□□□□□ -1.55
USP54-202ENST00000413442 PRSS45Q7RTY3 260 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms