RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZNF17P17021 662 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 CTSSP25774 331 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 HRH1P35367 487 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 CD96P40200 585 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 CASRP41180 1078 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 ZFP36L1Q07352 338 aaKnown RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 C10orf128Q5T292 105 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 LYG2Q86SG7 212 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 BEST3Q8N1M1 668 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 OR2Y1Q8NGV0 311 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 KCNG3Q8TAE7 436 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 C1orf147Q96MC9 270 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 JSRP1Q96MG2 331 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 NAA11Q9BSU3 229 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 MFFQ9GZY8 342 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 NELFAQ9H3P2 528 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 LOC100509620A0A075B734 347 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 A0A0A6YYD4 124 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 TEX51A0A1B0GUA7 166 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 NPIPA2E9PIF3 369 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 NPIPA3F8WFD2 350 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 G3V3Y1 287 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 CDC14BO60729 498 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 CD8AP01732 235 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 LIPCP11150 499 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 POU3F2P20265 443 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 ZBTB25P24278 435 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 GK2Q14410 553 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 PHYHD1Q5SRE7 291 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 PEAR1Q5VY43 1037 aaPredicted RBP14.85□□□□□ -0.03
NUP50-203ENST00000407019 LIN54Q6MZP7 749 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 TMEM156Q8N614 296 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 TMEM104Q8NE00 496 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 OR14K1Q8NGZ2 314 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 LRRC20Q8TCA0 184 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 SCARB1Q8WTV0 552 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 MRGPRFQ96AM1 343 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 PGAM5Q96HS1 289 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 SH2D2AQ9NP31 389 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 KCNK7Q9Y2U2 307 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 IGHV3-15A0A0B4J1V0 119 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 VAMP5O95183 116 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 WDPCPO95876 746 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 IFNA6P05013 189 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 GSTP1P09211 210 aaKnown RBP14.84□□□□□ -0.03
NUP50-203ENST00000407019 AGTR1P30556 359 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 ZNF133P52736 654 aaPredicted RBP14.84□□□□□ -0.03
NUP50-203ENST00000407019 SRSF4Q08170 494 aaKnown RBP14.84□□□□□ -0.03
NUP50-203ENST00000407019 FGL1Q08830 312 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 ALKAL2Q6UX46 152 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 FOXL2NBQ6ZUU3 175 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 RTN4RL2Q86UN3 420 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 RPS19BP1Q86WX3 136 aaKnown RBP14.84□□□□□ -0.03
NUP50-203ENST00000407019 GJC3Q8NFK1 279 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 C17orf50Q8WW18 174 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 NTNG2Q96CW9 530 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 RAB3CQ96E17 227 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 TMEM41AQ96HV5 264 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 ZNF385AQ96PM9 386 aaKnown RBP14.84□□□□□ -0.03
NUP50-203ENST00000407019 GPER1Q99527 375 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 TMEM59Q9BXS4 323 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 ZNF160Q9HCG1 818 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 HPF1Q9NWY4 346 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 RDH8Q9NYR8 311 aa14.84□□□□□ -0.03
NUP50-203ENST00000407019 NSG1A0A0A6YYJ2 146 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 SMAD9O15198 467 aaKnown RBP14.83□□□□□ -0.03
NUP50-203ENST00000407019 ZIC3O60481 467 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 CER1O95813 267 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 IL2RAP01589 272 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 UBBP0CG47 229 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 CSNK2A1P68400 391 aaPredicted RBP14.83□□□□□ -0.03
NUP50-203ENST00000407019 PPP1R1AQ13522 171 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 ENDOGQ14249 297 aaKnown RBP14.83□□□□□ -0.03
NUP50-203ENST00000407019 FAM189A2Q15884 450 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 OR9K2Q8NGE7 335 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 CST11Q9H112 138 aa14.83□□□□□ -0.03
NUP50-203ENST00000407019 ZNF230Q9UIE0 474 aaPredicted RBP14.83□□□□□ -0.03
NUP50-203ENST00000407019 hCG_1807616A0A1W2PRN6 198 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 PDGFBP01127 241 aaPredicted RBP14.83□□□□□ -0.04
NUP50-203ENST00000407019 ZNF250P15622 560 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 HIST1H1DP16402 221 aaKnown RBP14.83□□□□□ -0.04
NUP50-203ENST00000407019 FOLR3P41439 243 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 MLF1P58340 268 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 EIF3IQ13347 325 aaKnown RBP14.83□□□□□ -0.04
NUP50-203ENST00000407019 FAM209AQ5JX71 171 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 FAHD2BQ6P2I3 314 aaPredicted RBP14.83□□□□□ -0.04
NUP50-203ENST00000407019 SUN5Q8TC36 379 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 SSC4DQ8WTU2 575 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 RBPMSQ93062 196 aaKnown RBP14.83□□□□□ -0.04
NUP50-203ENST00000407019 FAHD2AQ96GK7 314 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 UCN2Q96RP3 112 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 PDCD10Q9BUL8 212 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 BANF2Q9H503 90 aa14.83□□□□□ -0.04
NUP50-203ENST00000407019 IGKV1-9A0A0C4DH69 117 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 C9orf170A2RU37 121 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 E9PLN8 166 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 SOCS1O15524 211 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 DHHO43323 396 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 IGLV3-1P01715 115 aa14.82□□□□□ -0.04
NUP50-203ENST00000407019 PMP2P02689 132 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms