RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 UBBP0CG47 229 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 PTHLHP12272 177 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 GTF2F2P13984 249 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 RCVRNP35243 200 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 OC90Q02509 493 aaPredicted RBP9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 PMPCAQ10713 525 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ECH1Q13011 328 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 SF3B4Q15427 424 aaKnown RBP eCLIP9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 LINC00303Q3SY05 128 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 TMEM255AQ5JRV8 349 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ABHD17BQ5VST6 288 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 FAM27BQ5VT28 67 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ZNF782Q6ZMW2 699 aaPredicted RBP9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 Q6ZSR3 168 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ZNF627Q7L945 461 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 YRDCQ86U90 279 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 GGNQ86UU5 652 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 COMMD2Q86X83 199 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 OR11H7Q8NGC8 314 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 OR4C16Q8NGL9 310 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 GRPEL2Q8TAA5 225 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 CPT1CQ8TCG5 803 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 CPNE4Q96A23 557 aaPredicted RBP9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 PGAM5Q96HS1 289 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ADGRG7Q96K78 797 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 UCN2Q96RP3 112 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 CNTD2Q9H8S5 307 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 GPR84Q9NQS5 396 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 FOXJ2Q9P0K8 574 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 UPB1Q9UBR1 384 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 ZNF222Q9UK12 451 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 NPTNQ9Y639 398 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 SDK2Q58EX2 2172 aa9.23□□□□□ -0.93
POLR2J3-201ENST00000379340 IGHV3-15A0A0B4J1V0 119 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 A0A0G2JMM0 328 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 A0A1W2PPB8 328 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 A0A1W2PRS3 328 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 PMS2P1A4D2B8 440 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 ZNF716A6NP11 495 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 KIR3DP1A8MWS1 328 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 MASP2O00187 686 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SNAPC5O75971 98 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 ALX3O95076 343 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 IGLV3-1P01715 115 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 CST2P09228 141 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 POU3F2P20265 443 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 GDF1P27539 372 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 OTX1P32242 354 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 THBS4P35443 961 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 ZNF93P35789 620 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 VEGFCP49767 419 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SELENOPP49908 381 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 RIPPLY1Q0D2K3 151 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 PHYHD1Q5SRE7 291 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 FAM57BQ71RH2 274 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 BIVMQ86UB2 503 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 GPR137CQ8N3F9 429 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SPICQ8N5J4 248 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 CLEC1AQ8NC01 280 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 OR52N4Q8NGI2 321 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 OR4D6Q8NGJ1 314 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 PCSK5Q92824 1860 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SPTSSAQ969W0 71 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SEH1LQ96EE3 360 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 RBM24Q9BX46 236 aaKnown RBP9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 OR10A4Q9H209 315 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 KCNK15Q9H427 330 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 NKIRAS2Q9NYR9 191 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 LRFN1Q9P244 771 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 SCP2D1Q9UJQ7 156 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 KNTC1P50748 2209 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
POLR2J3-201ENST00000379340 TMEM14DPA8MWL7 114 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 FABP7O15540 132 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 CREBL2O60519 120 aaPredicted RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 MTRF1O75570 445 aaKnown RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 TRAPPC6AO75865 159 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 CHRM2P08172 466 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 GSTT2P0CG29 244 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 EIF2S3P41091 472 aaKnown RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 GFRA1P56159 465 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 GALK2Q01415 458 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 SCRN3Q0VDG4 424 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 AIMP2Q13155 320 aaKnown RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 RAB35Q15286 201 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 ZMYND11Q15326 602 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 STK11Q15831 433 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 CCDC92Q53HC0 331 aaPredicted RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 WIPI1Q5MNZ9 446 aaPredicted RBP9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 RIPPLY2Q5TAB7 128 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 STEAP1BQ6NZ63 245 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 AAED1Q7RTV5 226 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 GABRG1Q8N1C3 465 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 FAM109AQ8N4B1 249 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 OR14K1Q8NGZ2 314 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 AQP3Q92482 292 aa9.21□□□□□ -0.93
POLR2J3-201ENST00000379340 TMEM45BQ96B21 275 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1030.1 ms