RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TRAV9-1A0A075B6T8 112 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 TRAV39A0A0B4J263 110 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 NPIPB15A6NHN6 443 aaPredicted RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 UTS2O95399 124 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 CD226Q15762 336 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 IMMP2LQ96T52 175 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 DMRT3Q9NQL9 472 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 C11orf98E9PRG8 122 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 FOXA1P55317 472 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 PDGFRLQ15198 375 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 RPS27LQ71UM5 84 aaKnown RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 NKAIN4Q8IVV8 208 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 GPR32P1Q8NGA4 272 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 NUS1Q96E22 293 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 ABHD14BQ96IU4 210 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 PIPOXQ9P0Z9 390 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 OOEPA6NGQ2 149 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 PRKRAO75569 313 aaKnown RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 SMPD1P17405 629 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 CD1AP06126 327 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 GLRA1P23415 457 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 OR1D2P34982 312 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 CLEC10AQ8IUN9 316 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 GPR34Q9UPC5 381 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 MRPS16Q9Y3D3 137 aaKnown RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 MYBPHLA2RUH7 354 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 LGALS2P05162 132 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 FGF5P12034 268 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 ELAVL4P26378 380 aaKnown RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 TGFBR1P36897 503 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 CSNK1DP48730 415 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 ACKR1Q16570 336 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 ASTLQ6HA08 431 aaPredicted RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 A0A087WUU8 490 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 PEX12O00623 359 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 HLA-DQA1P01909 254 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 LIMS1P48059 325 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 PLXDC2Q6UX71 529 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 OR11H7Q8NGC8 314 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 THOC3Q96J01 351 aaKnown RBP6.01□□□□□ -1.45
UBR4-204ENST00000375254 MRGPRX1Q96LB2 322 aa6.01□□□□□ -1.45
UBR4-204ENST00000375254 A0A1B0GU03 582 aa6□□□□□ -1.45
UBR4-204ENST00000375254 C7orf71A4D174 169 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CTSDP07339 412 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 SOD3P08294 240 aa6□□□□□ -1.45
UBR4-204ENST00000375254 FBLN7Q53RD9 439 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SPATA6Q9NWH7 488 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 CARD17Q5XLA6 110 aa6□□□□□ -1.45
UBR4-204ENST00000375254 GLIPR1L1Q6UWM5 242 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SGMS2Q8NHU3 365 aa6□□□□□ -1.45
UBR4-204ENST00000375254 METTL7AQ9H8H3 244 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CD207Q9UJ71 328 aa6□□□□□ -1.45
UBR4-204ENST00000375254 ZNF443Q9Y2A4 671 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 SLC17A2O00624 439 aa6□□□□□ -1.45
UBR4-204ENST00000375254 NDUFA2O43678 99 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CLDN7O95471 211 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CCR5P51681 352 aa6□□□□□ -1.45
UBR4-204ENST00000375254 LTC4SQ16873 150 aa6□□□□□ -1.45
UBR4-204ENST00000375254 OR8G2PQ6IF36 304 aa6□□□□□ -1.45
UBR4-204ENST00000375254 RTN4RL1Q86UN2 441 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 NXPE3Q969Y0 559 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SLC25A18Q9H1K4 315 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MTCH1Q9NZJ7 389 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CYSLTR1Q9Y271 337 aa6□□□□□ -1.45
UBR4-204ENST00000375254 COCHO43405 550 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CD68P34810 354 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 DUSP5Q16690 384 aa6□□□□□ -1.45
UBR4-204ENST00000375254 NRIP2Q9BQI9 281 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SMG9Q9H0W8 520 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 CTNNBIP1Q9NSA3 81 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 TMEM150BA6NC51 233 aa6□□□□□ -1.45
UBR4-204ENST00000375254 H3BSH0 61 aa6□□□□□ -1.45
UBR4-204ENST00000375254 FCGR2AP12318 317 aa6□□□□□ -1.45
UBR4-204ENST00000375254 EN2P19622 333 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 PMELP40967 661 aa6□□□□□ -1.45
UBR4-204ENST00000375254 ZNF506Q5JVG8 444 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SPANXN5Q5MJ07 72 aa6□□□□□ -1.45
UBR4-204ENST00000375254 RNASEKQ6P5S7 137 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 LBX2Q6XYB7 198 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CLEC20AQ6ZU45 233 aa6□□□□□ -1.45
UBR4-204ENST00000375254 NUFIP2Q7Z417 695 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 TP53I13Q8NBR0 393 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 OR2V2Q96R30 315 aa6□□□□□ -1.45
UBR4-204ENST00000375254 PSG11Q9UQ72 335 aa6□□□□□ -1.45
UBR4-204ENST00000375254 H3BVH4 76 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CTNSO60931 367 aa6□□□□□ -1.45
UBR4-204ENST00000375254 KLF7O75840 302 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 FBXO45P0C2W1 286 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SLC35A4Q96G79 324 aa6□□□□□ -1.45
UBR4-204ENST00000375254 PTPN18Q99952 460 aa6□□□□□ -1.45
UBR4-204ENST00000375254 PCGF1Q9BSM1 259 aa6□□□□□ -1.45
UBR4-204ENST00000375254 EPHX3Q9H6B9 360 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SRD5A3Q9H8P0 318 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MRPS18AQ9NVS2 196 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 TNFSF18Q9UNG2 199 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SMPD2O60906 423 aa6□□□□□ -1.45
UBR4-204ENST00000375254 DCTDP32321 178 aa6□□□□□ -1.45
UBR4-204ENST00000375254 GJC3Q8NFK1 279 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SGK494Q96LW2 274 aa6□□□□□ -1.45
UBR4-204ENST00000375254 DERL1Q9BUN8 251 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms