RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ADH6P28332 368 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 GNALP38405 381 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF81P51508 661 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 P2RY4P51582 365 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 SNTA1Q13424 505 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM176BQ3YBM2 270 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-202ENST00000374876 ZBTB37Q5TC79 503 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 CARD17Q5XLA6 110 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-202ENST00000374876 SULF2Q8IWU5 870 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 FADS6Q8N9I5 356 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 OR51S1Q8NGJ8 323 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 OR8S1Q8NH09 359 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 GPX8Q8TED1 209 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 SGCZQ96LD1 299 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 TAAR6Q96RI8 345 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 PBOV1Q9GZY1 135 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 DEPPQ9NTK1 212 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 MYEF2Q9P2K5 600 aaKnown RBP13.7□□□□□ -0.22
CCDC40-202ENST00000374876 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
CCDC40-202ENST00000374876 PRRC2CQ9Y520 2896 aaKnown RBP13.7□□□□□ -0.22
CCDC40-202ENST00000374876 A0A0G2JMM0 328 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 A0A1W2PPB8 328 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 A0A1W2PRS3 328 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 UBE2QL1A1L167 161 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 KIR3DP1A8MWS1 328 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 CDK2AP1O14519 115 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 SYT7O43581 403 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 NME2P1O60361 137 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 TTRP02766 147 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 CD3DP04234 171 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF43P17038 809 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 NME2P22392 152 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 HSD11B1P28845 292 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 CAPZA1P52907 286 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 PSMA6P60900 246 aaKnown RBP13.69□□□□□ -0.22
CCDC40-202ENST00000374876 LGALSLQ3ZCW2 172 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-202ENST00000374876 C1orf100Q5SVJ3 147 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 TEX261Q6UWH6 196 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 ELMOD2Q8IZ81 293 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM178AQ8NBL3 297 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 OR6N1Q8NGY5 312 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 ZBTB8AQ96BR9 441 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 SNRNP40Q96DI7 357 aaKnown RBP13.69□□□□□ -0.22
CCDC40-202ENST00000374876 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-202ENST00000374876 U3KQ87 197 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 A6NJ64 397 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF814B7Z6K7 855 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 BDKRB2P30411 391 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 RFC3P40938 356 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 TAS2R19P59542 299 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 TAF13Q15543 124 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 OR10S1Q8NGN2 331 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 DVL3Q92997 716 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-202ENST00000374876 SEH1LQ96EE3 360 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 RADILQ96JH8 1075 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 LHFPL6Q9Y693 200 aa13.69□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF878C9JN71 531 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 SULT2B1O00204 365 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 LDLRAD4O15165 306 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 P04436 131 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-202ENST00000374876 CDAP32320 146 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 PMPCAQ10713 525 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 OR10K2Q6IF99 312 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 GABRG1Q8N1C3 465 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 FTMTQ8N4E7 242 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 OR4D6Q8NGJ1 314 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 OR52B4Q8NGK2 314 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 PAQR8Q8TEZ7 354 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 PTX4Q96A99 478 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-202ENST00000374876 CA10Q9NS85 328 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 ASF1BQ9NVP2 202 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 ELF5Q9UKW6 265 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-202ENST00000374876 PINLYPA6NC86 204 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 METTL21EPA6NDL7 271 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 AQP7P3A6NL99 342 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 G3V3Q6 166 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 WISP2O76076 250 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 VSIG10L2P0DP72 767 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 SSTR2P30874 369 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 MEOX1P50221 254 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 TSPAN5P62079 268 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 SLC35A1P78382 337 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 RPUSD3Q6P087 351 aaKnown RBP13.68□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF813Q6ZN06 617 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 SLC36A1Q7Z2H8 476 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF680Q8NEM1 530 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 OR5D14Q8NGL3 314 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 SLCO5A1Q9H2Y9 848 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms