RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C1orf123Q9NWV4 160 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 MRPL15Q9P015 296 aaKnown RBP11.38□□□□□ -0.59
CXCL12-202ENST00000374426 SLC22A31A6NKX4 558 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 DVL1O14640 695 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 SASH3O75995 380 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 TSPAN15O95858 294 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 LHBP01229 141 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 GRPP07492 148 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 PSKH1P11801 424 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 NOS3P29474 1203 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 RPS27P42677 84 aaKnown RBP11.37□□□□□ -0.59
CXCL12-202ENST00000374426 POU4F2Q12837 409 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 GLYATL3Q5SZD4 288 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 HACD2Q6Y1H2 254 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 PDZD9Q8IXQ8 264 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 FGFRL1Q8N441 504 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 ZSCAN4Q8NAM6 433 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-202ENST00000374426 SCCPDHQ8NBX0 429 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 SPTSSAQ969W0 71 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 EFCAB1Q9HAE3 211 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 DCAF13Q9NV06 445 aaKnown RBP11.37□□□□□ -0.59
CXCL12-202ENST00000374426 ABCD2Q9UBJ2 740 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 KCNG2Q9UJ96 466 aa11.37□□□□□ -0.59
CXCL12-202ENST00000374426 A0A1B0GW55 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 GGT3PA6NGU5 568 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 A6NLC8 198 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 NDUFAB1O14561 156 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 ECDO95905 644 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 NUDT2P50583 147 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 KRT72Q14CN4 511 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 CDONQ4KMG0 1287 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 SLC35F1Q5T1Q4 408 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 GLYATQ6IB77 296 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-202ENST00000374426 Q6ZSV7 163 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 SPERTQ8NA61 448 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 OR56B2PQ8NGI1 322 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 CNTD2Q9H8S5 307 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 TCF7L1Q9HCS4 588 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 ADA2Q9NZK5 511 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
CXCL12-202ENST00000374426 SAMD4AQ9UPU9 718 aaKnown RBP11.36□□□□□ -0.59
CXCL12-202ENST00000374426 KPTNQ9Y664 436 aa11.36□□□□□ -0.59
CXCL12-202ENST00000374426 NOTCH3Q9UM47 2321 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 hCG_1807616A0A1W2PRN6 198 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 BHLHE40O14503 412 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 IDH3BO43837 385 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 GADD45GO95257 159 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 SEMG1P04279 462 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
CXCL12-202ENST00000374426 ZNF823P16415 610 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 PYCR1P32322 319 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 GSSP48637 474 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
CXCL12-202ENST00000374426 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 DRAM2Q6UX65 266 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 GDPGP1Q6ZNW5 385 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 LNX2Q8N448 690 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 ZNRF4Q8WWF5 429 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 ST8SIA4Q92187 359 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 DDOQ99489 341 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 NSRP1Q9H0G5 558 aaKnown RBP11.35□□□□□ -0.59
CXCL12-202ENST00000374426 SEMA6AQ9H2E6 1030 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 DPAGT1Q9H3H5 408 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 V9GYQ6 96 aa11.35□□□□□ -0.59
CXCL12-202ENST00000374426 A0A1B0GVI7 797 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 TVP23AA6NH52 213 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 SLC2A1P11166 492 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 PRKXP51817 358 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 SMIM11AP58511 58 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 PSME3P61289 254 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 SPIBQ01892 262 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.34□□□□□ -0.59
CXCL12-202ENST00000374426 PCK2Q16822 640 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 DCXRQ7Z4W1 244 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 LRTOMTQ8WZ04 291 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 CCL13Q99616 98 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 COPS4Q9BT78 406 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 C14orf119Q9NWQ9 140 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 FAM96BQ9Y3D0 163 aa11.34□□□□□ -0.59
CXCL12-202ENST00000374426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms