RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 OR13C9Q8NGT0 318 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 PP6455Q8WZ26 134 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 PGAM5Q96HS1 289 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 GPR137Q96N19 417 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 PRRT1Q99946 306 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
USF1-202ENST00000368020 B4GALT7Q9UBV7 327 aa12.35□□□□□ -0.43
USF1-202ENST00000368020 DHRS7CA6NNS2 312 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 G3V3Y1 287 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 SMAD9O15198 467 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 LMX1BO60663 402 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 IGLV3-1P01715 115 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 CD3DP04234 171 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 LIPCP11150 499 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 MPZP25189 248 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 RAD52P43351 418 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RPS18P62269 152 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 QRFPP83859 136 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 GUCA2AQ02747 115 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ENDOGQ14249 297 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 MPPED2Q15777 294 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 Q5BKY6 102 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RIPPLY2Q5TAB7 128 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ZNF468Q5VIY5 522 aaPredicted RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 Q6ZSR3 168 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 FAM57BQ71RH2 274 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 GPR137CQ8N3F9 429 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 OR2V1Q8NHB1 315 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 CPNE4Q96A23 557 aaPredicted RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 NABP1Q96AH0 204 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 CPNE2Q96FN4 548 aaPredicted RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 UCN2Q96RP3 112 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 KCNK15Q9H427 330 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 SLC2A8Q9NY64 477 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 MGAT4CQ9UBM8 478 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 PLEKHA6Q9Y2H5 1048 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 NCOA6Q14686 2063 aaPredicted RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 ACACAQ13085 2346 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RAB27BO00194 218 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 DHRS3O75911 302 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RGS11O94810 467 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RLN1P04808 185 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ITGB2P05107 769 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 CST2P09228 141 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 DLSTP36957 453 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 FOXC1Q12948 553 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ARL6IP1Q15041 203 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ABLIM2Q6H8Q1 611 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 FAAP20Q6NZ36 180 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 Q6ZTK2 550 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 SLC36A1Q7Z2H8 476 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 IL22RA1Q8N6P7 574 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 EXO5Q9H790 373 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 BEX1Q9HBH7 125 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 ZNF391Q9UJN7 358 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 KLK13Q9UKR3 277 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
USF1-202ENST00000368020 CEP295Q9C0D2 2601 aa12.34□□□□□ -0.43
USF1-202ENST00000368020 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 LRRC3CA6NJW4 275 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 OR2A4O95047 310 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 TPOP07202 933 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 HCKP08631 526 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 GSTP1P09211 210 aaKnown RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ANXA7P20073 488 aaKnown RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 KLK2P20151 261 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 POU3F2P20265 443 aaPredicted RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 ZP1P60852 638 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 SCRN3Q0VDG4 424 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 RAB35Q15286 201 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ABHD17BQ5VST6 288 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 CHMP1BQ7LBR1 199 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 GGNQ86UU5 652 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ANGPTL5Q86XS5 388 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ZNF101Q8IZC7 436 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ZIC4Q8N9L1 334 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 OR10R2Q8NGX6 335 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 FAM71F1Q96KD3 344 aaPredicted RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 SEC22CQ9BRL7 303 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms