RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 HIST1H2BOP23527 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 CRABP1P29762 137 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BBP33778 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 THBS4P35443 961 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BDP58876 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BCP62807 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-201ENST00000357179 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 MAMDC2Q7Z304 686 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-201ENST00000357179 DPY19L4Q7Z388 723 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 CCL4L1Q8NHW4 92 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 CD300LFQ8TDQ1 290 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 OR10C1Q96KK4 312 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 SLC35B3Q9H1N7 401 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 SLC26A1Q9H2B4 701 aa13.08□□□□□ -0.32
TOP3B-201ENST00000357179 A0A0J9YY10 115 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 SFT2D2O95562 160 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
TOP3B-201ENST00000357179 NUTF2P61970 127 aaKnown RBP13.07□□□□□ -0.32
TOP3B-201ENST00000357179 ERV3-1Q14264 604 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 OIT3Q8WWZ8 545 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 C2orf50Q96LR7 162 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
TOP3B-201ENST00000357179 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 FAM86C1Q9NVL1 165 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 OR5H15A6NDH6 313 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 OR5H1A6NKK0 313 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 ZNF724A8MTY0 619 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 IFNA6P05013 189 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
TOP3B-201ENST00000357179 TBPP20226 339 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 CTXN1P60606 82 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 TCEA2Q15560 299 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 C14orf28Q4W4Y0 310 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 WBP2NLQ6ICG8 309 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 ZNF529Q6P280 563 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 NUP54Q7Z3B4 507 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 OR6X1Q8NH79 312 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 TMEM230Q96A57 120 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 SMOC1Q9H4F8 434 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 CKLFQ9UBR5 152 aa13.07□□□□□ -0.32
TOP3B-201ENST00000357179 RAB27BO00194 218 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 SFTPBP07988 381 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 PVRP15151 417 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ITPRIPL2Q3MIP1 535 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 MESTQ5EB52 335 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 GFI1BQ5VTD9 330 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 CLEC18BQ6UXF7 455 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 RD3Q7Z3Z2 195 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ATG4DQ86TL0 474 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 FAM219AQ8IW50 185 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 AMELYQ99218 206 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 PARP12Q9H0J9 701 aaKnown RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 FAM212BQ9NTI7 297 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 TAS2R4Q9NYW5 299 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 LRIT1Q9P2V4 623 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 DHDHQ9UQ10 334 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 NME2P1O60361 137 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ASAH2BP0C7U1 165 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 CT45A8P0DMV1 189 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 CT45A9P0DMV2 189 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 FSTP19883 344 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 NUBP1P53384 320 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 IGLV3-21P80748 117 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 CT45A2Q5DJT8 189 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 MED25Q71SY5 747 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 OR5R1Q8NH85 324 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ASB5Q8WWX0 329 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 TSACCQ96A04 125 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 MMP25Q9NPA2 562 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 GTF2A1LQ9UNN4 478 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 SLC22A13Q9Y226 551 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 SCN2AQ99250 2005 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ADAM10O14672 748 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ZNF354AO60765 605 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 KIR2DL1P43626 348 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-201ENST00000357179 SLC9A3R2Q15599 337 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 ZNF674Q2M3X9 581 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 LRRC69Q6ZNQ3 347 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 BCORP1Q8N888 145 aa13.06□□□□□ -0.32
TOP3B-201ENST00000357179 OR4C3Q8NH37 302 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms