RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SEBOXQ9HB31 216 aaPredicted RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 GPR84Q9NQS5 396 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 DOK5Q9P104 306 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 E5RGE8 158 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ADRB1P08588 477 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SLC10A3P09131 477 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 CRISP2P16562 243 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 DUS3LQ96G46 650 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 LAMP3Q9UQV4 416 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 NSG2Q9Y328 171 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 OR51B4Q9Y5P0 310 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 LAMA4Q16363 1823 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ZC3H12DA2A288 527 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 KLK10O43240 276 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 NKAIN1Q4KMZ8 207 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 FADS6Q8N9I5 356 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 C8orf44Q96CB5 159 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 ADGRL4Q9HBW9 690 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 SLCO2B1O94956 709 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 SLC35E2P0CK97 266 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 FFAR4Q5NUL3 377 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 C11orf54Q9H0W9 315 aaPredicted RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 NDUFB11Q9NX14 153 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 COA4Q9NYJ1 87 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 C3orf30Q96M34 536 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 BET1LQ9NYM9 111 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RTP5Q14D33 572 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 TRMT12Q53H54 448 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 KMT5CQ86Y97 462 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 SLAMF8Q9P0V8 285 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 UBE2L6O14933 153 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 TSPAN12O95859 305 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 LIM2P55344 173 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 KLHDC8BQ8IXV7 354 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 MFSD4AQ8N468 514 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 GSX1Q9H4S2 264 aaPredicted RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 A4GALTQ9NPC4 353 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 BRWD1Q9NSI6 2320 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RPL12P30050 165 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 OR3A1P47881 315 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 HERVK_113P61574 105 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 HIST1H3AP68431 136 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 OR5R1Q8NH85 324 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 EGLN2Q96KS0 407 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 PRSS44E7EML9 344 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RHBDL1O75783 438 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 GALR1P47211 349 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RPL30P62888 115 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RACK1P63244 317 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 HFEQ30201 348 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 EDARADDQ8WWZ3 215 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 ADGRG7Q96K78 797 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 M0R3E3 92 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 PI3P19957 117 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 RCL1Q9Y2P8 373 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
PTPN4-201ENST00000263708 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
PTPN4-201ENST00000263708 TRPM6Q9BX84 2022 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 M0QZQ0 153 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 FURINP09958 794 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 IVDP26440 423 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 HOXD9P28356 352 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 DEFB108AA8MXU0 73 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 SYT5O00445 386 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 LYZL6O75951 148 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 INPP5JQ15735 1006 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 TXLNGYQ9BZA5 131 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 STAG3L2P0CL84 134 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 LYZP61626 148 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 PELI1Q96FA3 418 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 Q96M85 177 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ZXDAP98168 799 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 GPX7Q96SL4 187 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 B4GALT1P15291 398 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ZBTB25P24278 435 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 COX7A1P24310 79 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF740Q8NDX6 193 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 TTRP02766 147 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 SLC6A12P48065 614 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 SPINK9Q5DT21 86 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 FAAP24Q9BTP7 215 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 MRC1P22897 1456 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 PRSS1P07477 247 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 SP1P08047 785 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 GIPP09681 153 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ACHEP22303 614 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms