RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CEACAM5P06731 702 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 BMP5P22003 454 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 AKR1C3P42330 323 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 Q1RN00 199 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM102Q8N9M5 508 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-201ENST00000225964 JAM3Q9BX67 310 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 FBXL4Q9UKA2 621 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 SLC22A13Q9Y226 551 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 OR2A25A4D2G3 310 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 K7EQS6 105 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 HRH1P35367 487 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 ASCL1P50553 236 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 DHODHQ02127 395 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 C1orf210Q8IVY1 113 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.5
COL1A1-201ENST00000225964 NDUFB11Q9NX14 153 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 VMA21Q3ZAQ7 101 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM211Q6ICI0 200 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 MFSD4AQ8N468 514 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 SLCO1C1Q9NYB5 712 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 ING1Q9UK53 422 aaPredicted RBP11.96□□□□□ -0.5
COL1A1-201ENST00000225964 NPTNQ9Y639 398 aa11.96□□□□□ -0.5
COL1A1-201ENST00000225964 ARRB2P32121 409 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PGFP49763 221 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PTRH1Q86Y79 214 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 DCTN6O00399 190 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PDGFAP04085 211 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PI3P19957 117 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 LIPAP38571 399 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SSX7Q7RTT5 188 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SLC25A46Q96AG3 418 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PDFQ9HBH1 243 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 A4GNTQ9UNA3 340 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 ATF1P18846 271 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 FUT6P51993 359 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PIGPP57054 158 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SLC36A1Q7Z2H8 476 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 CCL17Q92583 94 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RPUSD4Q96CM3 377 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 CMBLQ96DG6 245 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 TEX101Q9BY14 249 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SMOC1Q9H4F8 434 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 GPR31O00270 319 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 UPK1AO00322 258 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 BSGP35613 385 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RPS19P39019 145 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 PRSS36Q5K4E3 855 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RPEQ96AT9 228 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 CIB3Q96Q77 187 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 FOXB1Q99853 325 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 GAL3ST2Q9H3Q3 398 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 NAGKQ9UJ70 344 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RAF1P04049 648 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SPP1P10451 314 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 RAB1AP62820 205 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SLC17A1Q14916 467 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 C4orf17Q53FE4 359 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 ZNF787Q6DD87 383 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 FBXL6Q8N531 539 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 NT5CQ8TCD5 201 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 SCPEP1Q9HB40 452 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
COL1A1-201ENST00000225964 UGT2A1Q9Y4X1 527 aa11.95□□□□□ -0.5
COL1A1-201ENST00000225964 LMO7DNF2Z398 122 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 SNRPNP63162 240 aaKnown RBP11.94□□□□□ -0.5
COL1A1-201ENST00000225964 FAM53BQ14153 422 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 TRIP6Q15654 476 aaKnown RBP11.94□□□□□ -0.5
COL1A1-201ENST00000225964 NUDCD2Q8WVJ2 157 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 MAGT1Q9H0U3 335 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 RCL1Q9Y2P8 373 aaKnown RBP11.94□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 FAAP20Q6NZ36 180 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 OR5H6Q8NGV6 325 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 PLA2G2FQ9BZM2 168 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 UBE2L5PA0A1B0GUS4 154 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 DIO1P49895 249 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 GPX8Q8TED1 209 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-201ENST00000225964 DHHO43323 396 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 HPP00738 406 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 COX7A1P24310 79 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-201ENST00000225964 BTNL3Q6UXE8 466 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 C11orf42Q8N5U0 333 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 SLC26A1Q9H2B4 701 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 RNF167Q9H6Y7 350 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 PPIL1Q9Y3C6 166 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 A0A0B4J203 849 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 FCMRO60667 390 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms