RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr1255A2AUA4 310 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vipr2P41588 437 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 NptnP97300 397 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Adam26bQ6IMH6 699 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1277Q8VF41 303 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr108Q8VFA1 320 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc22a26Q91WJ2 552 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lrrc51Q9DAK8 192 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ybx2Q9Z2C8 360 aaKnown RBP14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 SrcapA0A087WQ44 3271 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm7697A0A0J9YUH2 350 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm9495A0A0J9YUZ3 350 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 MiipA2A7Y5 387 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fnd3c2A2AP83 941 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sult2a3D3Z1W5 285 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pcdh1F7BJK1 1077 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 B3galt1O54904 326 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01851 173 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01852 173 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tdpoz5Q6YCH1 340 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tmprss7Q8BIK6 829 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r226Q8R2A8 298 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr291Q8VF60 317 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm17087V9GXQ2 156 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 SptbP15508 2128 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 GipP48756 144 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Cxcl5P50228 132 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 HbegfQ06186 208 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm10644Q3TZG3 87 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tra2aQ6PFR5 281 aaKnown RBP14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r35Q8R2E2 296 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 2210010C04RikQ9CPN9 247 aaKnown RBP14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tmem218Q9CQ44 115 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Q9CQT6 229 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Kcnip3Q9QXT8 256 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dmrtb1A2A9I7 359 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hsd3b2P26149 373 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Alox5apP30355 161 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pax4P32115 349 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fgf14P70379 247 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dtx3Q80V91 347 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Calhm2Q8VEC4 323 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Asb16Q8VHS5 453 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Nudt22Q9DD16 308 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Kcnd3Q9Z0V1 655 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm4950D3YUM8 205 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm5916G5E8W5 102 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ms4a18J3QN01 344 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr893K7N678 312 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 StarP51557 284 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 CbfbQ08024 187 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Samd12Q0VE29 161 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 CenptQ3TJM4 515 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ccdc106Q3ULM0 279 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Spns1Q8R0G7 528 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr970Q8VFN3 311 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 AldobQ91Y97 364 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tomm34Q9CYG7 309 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gpr37Q9QY42 600 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rpl23a-ps3A0A140T8M7 156 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 A0A286YDG0 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm10376D3YXI8 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm3676D3Z236 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn2r80E9Q1L0 863 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn2r82G3UWA2 865 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm10375L7N286 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm3573L7N292 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rpl23aP62751 156 aaKnown RBP14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vamp3P63024 103 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 1700066B19RikQ3TS39 127 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lrp10Q7TQH7 713 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fahd1Q8R0F8 227 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr780Q8VEU0 312 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr341Q8VGK9 313 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 1700001F09RikQ9DAR5 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm15013V9GWY0 266 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dock3Q8CIQ7 2027 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trbv2A0A0B4J1G8 114 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Calhm1D3Z291 348 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mfsd4b5E9PYY6 479 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm10260F6YVP7 152 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr329-psM9MMK4 331 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 P01735 133 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Hoxb5P09079 269 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Klk1b11P15946 261 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nkx2-6P43688 289 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Galr1P56479 348 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ube2nP61089 152 aaKnown RBP14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SlbpP97440 275 aaKnown RBP14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Agbl5Q09M02 886 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1428Q0VDY1 314 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Flvcr2Q91X85 551 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Jam3Q9D8B7 310 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tex33Q9D9J2 266 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Thsd7bQ6P4U0 1607 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm3543D3Z235 184 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Il1r1P13504 576 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ppp1caP62137 330 aaKnown RBP14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ifna15Q61718 190 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Azgp1Q64726 307 aa14.14□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms