RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 UFSP2Q9NUQ7 469 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 CMTM6Q9NX76 183 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 A0A1W2PRG6 482 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 B2RBV5 119 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
SNX1-214ENST00000625244 GYPAP02724 150 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 COX5BP10606 129 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 LMO1P25800 156 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 PAX6P26367 422 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 HTR5AP47898 357 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 RAD23AP54725 363 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 RGS8P57771 180 aaPredicted RBP11.28□□□□□ -0.6
SNX1-214ENST00000625244 CD47Q08722 323 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 KCNJ8Q15842 424 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 LRRC23Q53EV4 343 aaPredicted RBP11.28□□□□□ -0.6
SNX1-214ENST00000625244 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
SNX1-214ENST00000625244 ARMC4Q5T2S8 1044 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 PRAMEF6Q5VXH4 476 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 DEFB107AQ8IZN7 70 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 CLDN22Q8N7P3 220 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 Q8N7P7 452 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 SLC7A13Q8TCU3 470 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 ZNF583Q96ND8 569 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 OR5M11Q96RB7 305 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 ASCL2Q99929 193 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 RAB18Q9NP72 206 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 ABCD2Q9UBJ2 740 aa11.28□□□□□ -0.6
SNX1-214ENST00000625244 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
SNX1-214ENST00000625244 A0A1B0GWJ7 208 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 M0QX08 132 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 NME4O00746 187 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 FMO6PO60774 539 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 PF4P02776 101 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 SCG5P05408 212 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 UMPSP11172 480 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 LYL1P12980 280 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 FAHP16930 419 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 GSK3BP49841 420 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 GZMMP51124 257 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
SNX1-214ENST00000625244 POU4F2Q12837 409 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 OR8B8Q15620 311 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 C11orf91Q3C1V1 193 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 SPATS1Q496A3 300 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
SNX1-214ENST00000625244 FBXW12Q6X9E4 464 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 CCDC80Q76M96 950 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 MEPCEQ7L2J0 689 aaKnown RBP11.27□□□□□ -0.61
SNX1-214ENST00000625244 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 NANOGNBQ7Z5D8 188 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 Q8N2B8 174 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 SDR9C7Q8NEX9 313 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 LZICQ8WZA0 190 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 ERGIC1Q969X5 290 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 AJUBAQ96IF1 538 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 COG8Q96MW5 612 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 RNF7Q9UBF6 113 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 BAG5Q9UL15 447 aa11.27□□□□□ -0.61
SNX1-214ENST00000625244 A0A1B0GW55 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 ANGPTL7O43827 346 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DOK2O60496 412 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 ZFPL1O95159 310 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 LYPD3O95274 346 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 THY1P04216 161 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 CHRM2P08172 466 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L2P0CJ85 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L3P0CJ86 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L4P0CJ87 422 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L5P0CJ88 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L6P0CJ89 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L7P0CJ90 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 FPR3P25089 353 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 RASSF2P50749 326 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DAP3P51398 398 aaKnown RBP11.26□□□□□ -0.61
SNX1-214ENST00000625244 CD83Q01151 205 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DNAL1Q4LDG9 190 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4L9Q6RFH8 374 aaPredicted RBP11.26□□□□□ -0.61
SNX1-214ENST00000625244 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 ARHGAP24Q8N264 748 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 SMYD1Q8NB12 490 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 OR51G2Q8NGK0 314 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 FAM162AQ96A26 154 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 CDRT15Q96T59 188 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 DUX4Q9UBX2 424 aa11.26□□□□□ -0.61
SNX1-214ENST00000625244 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms