RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-217	ENST00000617133	OMP	P47874	163 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	GABRA4	P48169	554 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	IDH2	P48735	452 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	VEGFC	P49767	419 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CASP9	P55211	416 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SNU13	P55769	128 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TMEM50B	P56557	158 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RAB38	P57729	211 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RAB8A	P61006	207 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SKP1	P63208	163 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CDK5	Q00535	292 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ST3GAL3	Q11203	375 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ST3GAL4	Q11206	333 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TSPAN31	Q12999	210 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	BIK	Q13323	160 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	FAM53B	Q14153	422 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	GANAB	Q14697	944 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SPCS2	Q15005	226 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TRAM2	Q15035	370 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	NCF4	Q15080	339 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CACNA1E	Q15878	2313 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ZNF674	Q2M3X9	581 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TMEM44	Q2T9K0	475 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TIMM50	Q3ZCQ8	353 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	EIPR1	Q53HC9	387 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TMEM107	Q6UX40	140 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133		Q6ZPB1	254 aa	Predicted RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RASSF6	Q6ZTQ3	369 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	AHSA2	Q719I0	299 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	OOSP2	Q86WS3	158 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RBM45	Q8IUH3	476 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	GRAMD2A	Q8IUY3	354 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	DND1	Q8IYX4	353 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SLC43A2	Q8N370	569 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CSNK1A1L	Q8N752	337 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TMEM99	Q8N816	258 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CDRT4	Q8N9R6	151 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	PROKR2	Q8NFJ6	384 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	OR6C4	Q8NGE1	309 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	OR5D16	Q8NGK9	328 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	OR52J3	Q8NH60	311 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	S100Z	Q8WXG8	99 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ACOT11	Q8WXI4	607 aa	Predicted RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RERG	Q96A58	199 aa	Predicted RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RFT1	Q96AA3	541 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	KIAA1143	Q96AT1	154 aa	Predicted RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	C16orf58	Q96GQ5	468 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SDF2	Q99470	211 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CTRC	Q99895	268 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	DCUN1D5	Q9BTE7	237 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ZNF426	Q9BUY5	554 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SLIRP	Q9GZT3	109 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	ISYNA1	Q9NPH2	558 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CLN6	Q9NWW5	311 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	HRASLS2	Q9NWW9	162 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SLC39A1	Q9NY26	324 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	IL20	Q9NYY1	176 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	MAT2B	Q9NZL9	334 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	CCDC59	Q9P031	241 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	TRPC4	Q9UBN4	977 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	WARS2	Q9UGM6	360 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	FBXW2	Q9UKT8	454 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	RPL36	Q9Y3U8	105 aa	Known RBP	3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	KCNE3	Q9Y6H6	103 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SPACA6	W5XKT8	324 aa		3.91	□□□□□ -1.78
SEM1-217	ENST00000617133	SEC16A	O15027	2179 aa		3.9	□□□□□ -1.78
SEM1-217	ENST00000617133	USP24	Q9UPU5	2620 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133		A0A087WUU8	490 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133		A0A087X0K7	114 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133		A0A0J9YVX5	310 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	C13orf42	A0A1B0GVH6	325 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	C2orf92	A0A1B0GVN3	265 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	TMEM129	A0AVI4	362 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	SNTN	A6NMZ2	147 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	CLDN25	C9JDP6	229 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133		D6RAR5	112 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	SIGLEC5	O15389	551 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	ZNF749	O43361	778 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	STX11	O75558	287 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	LYPD3	O95274	346 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	NSA2	O95478	260 aa	Known RBP	3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	FADS2	O95864	444 aa	Known RBP	3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	PTH	P01270	115 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	IGF2	P01344	180 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	THY1	P04216	161 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	DBI	P07108	87 aa	Known RBP	3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	STS	P08842	583 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	CD36	P16671	472 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	GIF	P27352	417 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	PSMB9	P28065	219 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	GPR183	P32249	361 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	ETV6	P41212	452 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	SLC1A3	P43003	542 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	SERPINB10	P48595	397 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	RGS6	P49758	472 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	ZNF136	P52737	540 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	SMS	P52788	366 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	IL1RL1	Q01638	556 aa		3.9	□□□□□ -1.79
SEM1-217	ENST00000617133	RAB40B	Q12829	278 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms