RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 PHF19Q5T6S3 580 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 BADQ92934 168 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 SOSTQ9BQB4 213 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 PBOV1Q9GZY1 135 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 GDF2Q9UK05 429 aaPredicted RBP13.19□□□□□ -0.3
VPS36-207ENST00000611132 ALPK2Q86TB3 2170 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 GPANK1O95872 356 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
VPS36-207ENST00000611132 RAB11AP62491 216 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 FAM24BQ8N5W8 94 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 RFLNBQ8N5W9 214 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 SLX1AQ9BQ83 275 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 GPR84Q9NQS5 396 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 SUSD2Q9UGT4 822 aa13.19□□□□□ -0.3
VPS36-207ENST00000611132 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 PTP4A3O75365 173 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 CD1CP29017 333 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 PPP2CBP62714 309 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 PPP2CAP67775 309 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 TMEM176BQ3YBM2 270 aaPredicted RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 PUSL1Q8N0Z8 303 aaKnown RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 MRPS24Q96EL2 167 aaKnown RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 PRRX2Q99811 253 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 SHARPINQ9H0F6 387 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 DNAJB11Q9UBS4 358 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 SFT2D2O95562 160 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 TXNDC12O95881 172 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 HPP00738 406 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 FPR2P25090 351 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 SLC38A9Q8NBW4 561 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 GPX8Q8TED1 209 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 DHCR7Q9UBM7 475 aaKnown RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 ZNF230Q9UIE0 474 aaPredicted RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 ICOSLGO75144 302 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 OR2A4O95047 310 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 ZP1P60852 638 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 GRB2P62993 217 aaKnown RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 PNLIPRP3Q17RR3 467 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 RBMS3Q6XE24 437 aaKnown RBP13.18□□□□□ -0.3
VPS36-207ENST00000611132 LRRC18Q8N456 261 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 OR2A7Q96R45 310 aa13.18□□□□□ -0.3
VPS36-207ENST00000611132 CENPVL1A0A0U1RR11 272 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 SLC25A4P12235 298 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ABCD3P28288 659 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 NANOS3P60323 173 aaKnown RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 ELAVL1Q15717 326 aaKnown RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 TOMM34Q15785 309 aaPredicted RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 GUCA2BQ16661 112 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 PCK2Q16822 640 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 CES1P1Q9UKY3 287 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 RAB27BO00194 218 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 YKT6O15498 198 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ALOX12BO75342 701 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 CLDN17P56750 224 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 TAF9Q16594 264 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ISXQ2M1V0 245 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 PRSS41Q7RTY9 318 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 PIGCQ92535 297 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 ASH2LQ9UBL3 628 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 LPAR3Q9UBY5 353 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 XRCC2O43543 280 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 CT62P0C5K7 136 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 DRD1P21728 446 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 MOB3CQ70IA8 216 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 GAB2Q9UQC2 676 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 EFNB2P52799 333 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 DEFB133Q30KQ1 61 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 RPL7L1Q6DKI1 246 aaKnown RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 GNPNAT1Q96EK6 184 aaPredicted RBP13.17□□□□□ -0.3
VPS36-207ENST00000611132 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 MED29Q9NX70 200 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 MIOXQ9UGB7 285 aa13.17□□□□□ -0.3
VPS36-207ENST00000611132 DFFBO76075 338 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms