RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MEIKINA0A087WXM9 373 aa12□□□□□ -0.49
NEK3-205ENST00000610828 A0A0A6YYH2 397 aa12□□□□□ -0.49
NEK3-205ENST00000610828 OR5H15A6NDH6 313 aa12□□□□□ -0.49
NEK3-205ENST00000610828 TMEM235A6NFC5 223 aa12□□□□□ -0.49
NEK3-205ENST00000610828 A6NJ64 397 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
NEK3-205ENST00000610828 RAB6AP20340 208 aa12□□□□□ -0.49
NEK3-205ENST00000610828 SSBP1Q04837 148 aaKnown RBP12□□□□□ -0.49
NEK3-205ENST00000610828 STEAP1BQ6NZ63 245 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ZNF529Q6P280 563 aa12□□□□□ -0.49
NEK3-205ENST00000610828 PAQR4Q8N4S7 273 aaPredicted RBP12□□□□□ -0.49
NEK3-205ENST00000610828 ZNF431Q8TF32 576 aaPredicted RBP12□□□□□ -0.49
NEK3-205ENST00000610828 PGAM5Q96HS1 289 aa12□□□□□ -0.49
NEK3-205ENST00000610828 SF3B5Q9BWJ5 86 aaKnown RBP12□□□□□ -0.49
NEK3-205ENST00000610828 GON7Q9BXV9 100 aa12□□□□□ -0.49
NEK3-205ENST00000610828 RAB22AQ9UL26 194 aa12□□□□□ -0.49
NEK3-205ENST00000610828 KNTC1P50748 2209 aa12□□□□□ -0.49
NEK3-205ENST00000610828 PINLYPA6NC86 204 aa12□□□□□ -0.49
NEK3-205ENST00000610828 E9PLN8 166 aa12□□□□□ -0.49
NEK3-205ENST00000610828 TNFRSF10AO00220 468 aa12□□□□□ -0.49
NEK3-205ENST00000610828 SULT1C2O00338 296 aa12□□□□□ -0.49
NEK3-205ENST00000610828 DNPH1O43598 174 aa12□□□□□ -0.49
NEK3-205ENST00000610828 CXCL13O43927 109 aa12□□□□□ -0.49
NEK3-205ENST00000610828 CREBL2O60519 120 aaPredicted RBP12□□□□□ -0.49
NEK3-205ENST00000610828 MT-CO3P00414 261 aa12□□□□□ -0.49
NEK3-205ENST00000610828 RLN1P04808 185 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ZNF84P51523 738 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ZNF133P52736 654 aaPredicted RBP12□□□□□ -0.49
NEK3-205ENST00000610828 SUCLG1P53597 346 aaKnown RBP12□□□□□ -0.49
NEK3-205ENST00000610828 UNC119Q13432 240 aa12□□□□□ -0.49
NEK3-205ENST00000610828 DHRS13Q6UX07 377 aa12□□□□□ -0.49
NEK3-205ENST00000610828 DOK3Q7L591 496 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ANGPTL5Q86XS5 388 aa12□□□□□ -0.49
NEK3-205ENST00000610828 GABRG1Q8N1C3 465 aa12□□□□□ -0.49
NEK3-205ENST00000610828 MEIOBQ8N635 442 aa12□□□□□ -0.49
NEK3-205ENST00000610828 ROBO4Q8WZ75 1007 aa12□□□□□ -0.49
NEK3-205ENST00000610828 CCDC187A0A096LP49 1063 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 C5orf63A6NC05 138 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 BPNT1O95861 308 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 POU3F2P20265 443 aaPredicted RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 TAS2R19P59542 299 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 CDCP2Q5VXM1 449 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 FOXL2NBQ6ZUU3 175 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 PGAP1Q75T13 922 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 RNF144BQ7Z419 303 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 C20orf196Q8IYI0 205 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 C9orf62Q8N4C0 152 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 LILRB4Q8NHJ6 448 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 INTS12Q96CB8 462 aaKnown RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 CMBLQ96DG6 245 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 UTP23Q9BRU9 249 aaKnown RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 SCPEP1Q9HB40 452 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 GPN1Q9HCN4 374 aaPredicted RBP11.99□□□□□ -0.49
NEK3-205ENST00000610828 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 PLEK2Q9NYT0 353 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 FLVCR1Q9Y5Y0 555 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 RTTNQ86VV8 2226 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 CYB5AP00167 134 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 HCKP08631 526 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 DMRTC1Q5HYR2 192 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 RAB12Q6IQ22 244 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 ZNF101Q8IZC7 436 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 CHST4Q8NCG5 386 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 OR11H4Q8NGC9 324 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 OR10D3Q8NH80 312 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
NEK3-205ENST00000610828 RAB27BO00194 218 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CNR1P21554 472 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CCL1P22362 96 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CTSSP25774 331 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 NTF4P34130 210 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CD96P40200 585 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 MECP2P51608 486 aaKnown RBP11.98□□□□□ -0.49
NEK3-205ENST00000610828 QRFPP83859 136 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 ABHD17BQ5VST6 288 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 ZNF626Q68DY1 528 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CHMP1BQ7LBR1 199 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 OR5AS1Q8N127 324 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 OR52B4Q8NGK2 314 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 OR2V1Q8NHB1 315 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 GRPEL2Q8TAA5 225 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 FBXO17Q96EF6 278 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 MED30Q96HR3 178 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 EDEM2Q9BV94 578 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 CRLF2Q9HC73 371 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 NPDC1Q9NQX5 325 aaPredicted RBP11.98□□□□□ -0.49
NEK3-205ENST00000610828 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 C21orf140B9A014 251 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 M0QYG6 137 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 TSC22D2O75157 780 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 TOXO94900 526 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 RAB3DO95716 219 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 IL5P05113 134 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 DBHP09172 617 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 DNASE1P24855 282 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 RFC3P40938 356 aa11.98□□□□□ -0.49
NEK3-205ENST00000610828 FOXO1Q12778 655 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms